X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fdbsources%2FPdb.java;h=ae1f7941b7431d3fa2b78bfe5f4d4c1df2e76bf4;hb=e66322bfd895b80f19ae39ec0367a6c1cd4a93a3;hp=48ea306ffc91c985492f314e71a5e33b1a79a4be;hpb=2de8acfae59aced665e4c37ad0f7dcc2ed68818e;p=jalview.git diff --git a/src/jalview/ws/dbsources/Pdb.java b/src/jalview/ws/dbsources/Pdb.java index 48ea306..ae1f794 100644 --- a/src/jalview/ws/dbsources/Pdb.java +++ b/src/jalview/ws/dbsources/Pdb.java @@ -1,20 +1,19 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1) - * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.6) + * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle * - * This program is free software; you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation; either version 2 - * of the License, or (at your option) any later version. + * This file is part of Jalview. * - * This program is distributed in the hope that it will be useful, - * but WITHOUT ANY WARRANTY; without even the implied warranty of - * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the - * GNU General Public License for more details. + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. * - * You should have received a copy of the GNU General Public License - * along with this program; if not, write to the Free Software - * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License along with Jalview. If not, see . */ package jalview.ws.dbsources; @@ -156,8 +155,8 @@ public class Pdb extends EbiFileRetrievedProxy implements DbSourceProxy * PDBEntry entry = new PDBEntry(); // Construct the PDBEntry * entry.setId(id); if (entry.getProperty() == null) * entry.setProperty(new Hashtable()); - * entry.getProperty().put("chains", pdbchain.id + "=" + sq.getStart() + - * "-" + sq.getEnd()); sq.getDatasetSequence().addPDBId(entry); + * entry.getProperty().put("chains", pdbchain.id + "=" + sq.getStart() + * + "-" + sq.getEnd()); sq.getDatasetSequence().addPDBId(entry); */ // Add PDB DB Refs // We make a DBRefEtntry because we have obtained the PDB file from a