X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fdbsources%2FPfamFull.java;h=93b6227f81160730d4bbf8afe1769b991f7a6a0f;hb=8d5a12d996b49525f7c5b83f3cc280aeb7c3fda7;hp=3d3ab53d0f53e4f1bf5cbcd4b6c019aae23f0a4c;hpb=2de36153a84ca246643cd28b2ce05e9f4159dd89;p=jalview.git

diff --git a/src/jalview/ws/dbsources/PfamFull.java b/src/jalview/ws/dbsources/PfamFull.java
index 3d3ab53..93b6227 100644
--- a/src/jalview/ws/dbsources/PfamFull.java
+++ b/src/jalview/ws/dbsources/PfamFull.java
@@ -1,5 +1,19 @@
-/**
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
  * 
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  */
 package jalview.ws.dbsources;
 
@@ -7,7 +21,7 @@ import jalview.ws.seqfetcher.DbSourceProxy;
 
 /**
  * flyweight class specifying retrieval of Full family alignments from PFAM
- *
+ * 
  */
 public class PfamFull extends Pfam implements DbSourceProxy
 {
@@ -16,28 +30,38 @@ public class PfamFull extends Pfam implements DbSourceProxy
     super();
   }
 
-  /* (non-Javadoc)
+  /*
+   * (non-Javadoc)
+   * 
    * @see jalview.ws.dbsources.Pfam#getPFAMURL()
    */
-  protected String getPFAMURL()
+  protected String getXFAMURL()
   {
     return "http://pfam.sanger.ac.uk/family/alignment/download/format?alnType=full&format=stockholm&order=t&case=l&gaps=default&entry=";
   }
 
-  /* (non-Javadoc)
+  /*
+   * (non-Javadoc)
+   * 
    * @see jalview.ws.seqfetcher.DbSourceProxy#getDbName()
    */
   public String getDbName()
   {
     return "PFAM (Full)";
   }
+
   public String getDbSource()
   {
     return getDbName(); // so we have unique DbSource string.
   }
+
   public String getTestQuery()
   {
-    return "PF00535"; // TODO: Pick a better full alignment to retrieve.
+    return "PF03760";
   }
 
+public String getDbVersion() {
+	return null;
+}
+
 }