X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fdbsources%2FXfam.java;h=36d98915a11341da8e5059603d6cc78b0c55fb5d;hb=6ca8a32d88328b8f2162512f41c657c87e131045;hp=9340f659ef5e125b01546a2e61b04938ab6a0861;hpb=9d2408483e451285fd555c3cd6e0273977acbaa7;p=jalview.git diff --git a/src/jalview/ws/dbsources/Xfam.java b/src/jalview/ws/dbsources/Xfam.java index 9340f65..36d9891 100644 --- a/src/jalview/ws/dbsources/Xfam.java +++ b/src/jalview/ws/dbsources/Xfam.java @@ -22,7 +22,7 @@ package jalview.ws.dbsources; import java.util.Locale; -import jalview.bin.Cache; +import jalview.bin.Console; import jalview.datamodel.AlignmentI; import jalview.datamodel.DBRefEntry; import jalview.io.DataSourceType; @@ -65,10 +65,7 @@ public abstract class Xfam extends DbSourceProxyImpl // TODO: trap HTTP 404 exceptions and return null String xfamUrl = getURL(queries); - if (Cache.log != null) - { - Cache.log.debug("XFAM URL for retrieval is: " + xfamUrl); - } + Console.debug("XFAM URL for retrieval is: " + xfamUrl); AlignmentI rcds = new FormatAdapter().readFile(xfamUrl, DataSourceType.URL, FileFormat.Stockholm); @@ -90,8 +87,8 @@ public abstract class Xfam extends DbSourceProxyImpl String getURL(String queries) { - return getURLPrefix() + "/family/" + queries.trim().toUpperCase(Locale.ROOT) - + getURLSuffix(); + return getURLPrefix() + "/family/" + + queries.trim().toUpperCase(Locale.ROOT) + getURLSuffix(); } /**