X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fdbsources%2Fdas%2Fdatamodel%2FDasSequenceSource.java;fp=src%2Fjalview%2Fws%2Fdbsources%2Fdas%2Fdatamodel%2FDasSequenceSource.java;h=269baf1193510bc06737a018e03865e68e0bc1d5;hb=6316d355ff3e86cad23a834a737c68a394819ec9;hp=ebe0134b06bbef6e68e08d121f993224e5cf579e;hpb=02b7dff05a9e2b9ce6a95caed86be256da906d3f;p=jalview.git

diff --git a/src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java b/src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java
index ebe0134..269baf1 100644
--- a/src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java
+++ b/src/jalview/ws/dbsources/das/datamodel/DasSequenceSource.java
@@ -93,7 +93,7 @@ public class DasSequenceSource extends DbSourceProxyImpl implements
     }
     this.source = source;
     this.dbname = dbname;
-    this.dbrefname = dbrefname;
+    this.dbrefname = dbrefname.toUpperCase();
     if (coordsys!=null ) {
       this.coordsys = coordsys;
     }
@@ -253,6 +253,7 @@ public class DasSequenceSource extends DbSourceProxyImpl implements
               // in the XML
               Sequence sq = new Sequence(lbl, e.getContent().replaceAll(
                       "\\s+", ""));
+              sq.setStart(e.getStart().intValue());
               sq.addDBRef(new DBRefEntry(getDbSource(), getDbVersion()
                       + ":" + e.getVersion(), lbl));
               seqs.addElement(sq);