X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Febi%2FEBIFetchClient.java;h=3e8c55ed621b8f9d3a60c1d3f81911122211b139;hb=d2bf6a7b7e1bbb4774f13ba2733487ae6b7aae6d;hp=1dff32f1bd26d3a15324a2a014909c729bb05bb9;hpb=eaa8cc6ff032ac14e2bd96ee3bd27e80cfa74a25;p=jalview.git

diff --git a/src/jalview/ws/ebi/EBIFetchClient.java b/src/jalview/ws/ebi/EBIFetchClient.java
index 1dff32f..3e8c55e 100644
--- a/src/jalview/ws/ebi/EBIFetchClient.java
+++ b/src/jalview/ws/ebi/EBIFetchClient.java
@@ -91,7 +91,7 @@ public class EBIFetchClient
    * @param format
    *          the format wanted
    * @param extension
-   *          for the temporary file to hold response
+   *          for the temporary file to hold response (without separator)
    * @return the file holding the response
    * @throws OutOfMemoryError
    */
@@ -102,7 +102,7 @@ public class EBIFetchClient
     File outFile = null;
     try
     {
-      outFile = File.createTempFile("jalview", ext);
+      outFile = File.createTempFile("jalview", "." + ext);
       outFile.deleteOnExit();
       fetchData(ids, format, outFile);
       if (outFile.length() == 0)
@@ -139,7 +139,8 @@ public class EBIFetchClient
     }
 
     // note: outFile is currently always specified, so return value is null
-    String[] rslt = fetchBatch(querystring.toString(), database, format, outFile);
+    String[] rslt = fetchBatch(querystring.toString(), database, format,
+            outFile);
 
     return (rslt != null && rslt.length > 0 ? rslt : null);
   }
@@ -241,8 +242,7 @@ public class EBIFetchClient
         return null;
       }
       System.err.println("Unexpected exception when retrieving from "
-              + database
-              + "\nQuery was : '" + ids + "'");
+              + database + "\nQuery was : '" + ids + "'");
       ex.printStackTrace(System.err);
       return null;
     } finally