X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws1%2FSeqSearchWSThread.java;h=a28494cb7a26ce92f667c5d4ca02e4a0389a6dd0;hb=8073a17f5bbbec8cf01b8711cb5db256effcb05c;hp=a6e3731bda6fe3aeee874cc9b39408021da402c9;hpb=4d7f98a6dd54d9863ba449ec79dcd95d25ed863d;p=jalview.git diff --git a/src/jalview/ws/jws1/SeqSearchWSThread.java b/src/jalview/ws/jws1/SeqSearchWSThread.java index a6e3731..a28494c 100644 --- a/src/jalview/ws/jws1/SeqSearchWSThread.java +++ b/src/jalview/ws/jws1/SeqSearchWSThread.java @@ -34,7 +34,9 @@ import jalview.ws.AWsJob; import jalview.ws.JobStateSummary; import jalview.ws.WSClientI; +import java.util.HashMap; import java.util.Hashtable; +import java.util.Map; import java.util.Vector; import vamsas.objects.simple.MsaResult; @@ -168,7 +170,7 @@ class SeqSearchWSThread extends JWS1Thread implements WSClientI * * @return null or { Alignment(+features and annotation), NewickFile)} */ - public Object[] getAlignment(Alignment dataset, Hashtable featureColours) + public Object[] getAlignment(Alignment dataset, Map featureColours) { if (result != null && result.isFinished()) @@ -610,7 +612,7 @@ class SeqSearchWSThread extends JWS1Thread implements WSClientI // NewickFile nf[] = new NewickFile[jobs.length]; for (int j = 0; j < jobs.length; j++) { - Hashtable featureColours = new Hashtable(); + Map featureColours = new HashMap(); Alignment al = null; NewickFile nf = null; if (jobs[j].hasResults())