X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2FJabaPreset.java;h=fd9bbb4f6ac077a57caf7805ef1b5f1e627f9cb2;hb=865a855a4ca87eadb3e5ff284ed32ed307d9c34b;hp=c8177baa7daa04d91c6382f57023e92997be2b5f;hpb=c13784724ba3826e6cc3faeb85571cf30776592d;p=jalview.git

diff --git a/src/jalview/ws/jws2/JabaPreset.java b/src/jalview/ws/jws2/JabaPreset.java
index c8177ba..fd9bbb4 100644
--- a/src/jalview/ws/jws2/JabaPreset.java
+++ b/src/jalview/ws/jws2/JabaPreset.java
@@ -1,6 +1,24 @@
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Copyright (C) 2014 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
 package jalview.ws.jws2;
 
-import jalview.ws.jws2.Jws2Discoverer.Jws2Instance;
+import jalview.ws.jws2.jabaws2.Jws2Instance;
 import jalview.ws.params.ArgumentI;
 import jalview.ws.params.WsParamSetI;
 
@@ -8,58 +26,73 @@ import java.util.List;
 
 import compbio.metadata.Preset;
 
-public class JabaPreset implements WsParamSetI {
-  Preset p=null;
+public class JabaPreset implements WsParamSetI
+{
+  Preset p = null;
+
   Jws2Instance service;
-  public JabaPreset(Jws2Instance svc, Preset preset) {
-    service=svc;
-    p=preset;
+
+  public JabaPreset(Jws2Instance svc, Preset preset)
+  {
+    service = svc;
+    p = preset;
   }
+
   @Override
   public String getName()
   {
     return p.getName();
   }
+
   @Override
   public String getDescription()
   {
     return p.getDescription();
   }
+
   @Override
   public String[] getApplicableUrls()
   {
-    return new String[] { service.getUri()};
+    return new String[]
+    { service.getUri() };
   }
+
   @Override
   public String getSourceFile()
   {
     return null;
   }
+
   @Override
   public boolean isModifiable()
   {
     return false;
   }
+
   @Override
   public void setSourceFile(String newfile)
   {
-    throw new Error("Cannot set source file for "+getClass());
+    throw new Error("Cannot set source file for " + getClass());
   }
+
   @Override
   public List<ArgumentI> getArguments()
   {
-    try {
-    return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service.getRunnerConfig()));
-    }
-    catch (Exception e)
+    try
+    {
+      return JabaParamStore.getJwsArgsfromJaba(p.getArguments(service
+              .getRunnerConfig()));
+    } catch (Exception e)
     {
       e.printStackTrace();
-      throw new Error("Probable mismatch between service instance and preset!");
+      throw new Error(
+              "Probable mismatch between service instance and preset!");
     }
   }
+
   @Override
   public void setArguments(List<ArgumentI> args)
   {
-    throw new Error("Cannot set Parameters for a Jaba Web service's preset");      
+    throw new Error("Cannot set Parameters for a Jaba Web service's preset");
   }
-}
\ No newline at end of file
+}