X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2FJabawsMsaInterfaceAlignCalcWorker.java;h=ee36d4a461d4a500b771d9f460bacabd066ff5fc;hb=34524f89f84e7d9b85743300a6407aa1c0e2751a;hp=d45a0e1f27e36d8606349dc1298155a4550cf30f;hpb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;p=jalview.git diff --git a/src/jalview/ws/jws2/JabawsMsaInterfaceAlignCalcWorker.java b/src/jalview/ws/jws2/JabawsMsaInterfaceAlignCalcWorker.java index d45a0e1..ee36d4a 100644 --- a/src/jalview/ws/jws2/JabawsMsaInterfaceAlignCalcWorker.java +++ b/src/jalview/ws/jws2/JabawsMsaInterfaceAlignCalcWorker.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9) - * Copyright (C) 2015 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors * * This file is part of Jalview. * @@ -43,8 +43,8 @@ import compbio.metadata.JobSubmissionException; import compbio.metadata.ResultNotAvailableException; import compbio.metadata.WrongParameterException; -public abstract class JabawsMsaInterfaceAlignCalcWorker extends - AbstractJabaCalcWorker +public abstract class JabawsMsaInterfaceAlignCalcWorker + extends AbstractJabaCalcWorker { @SuppressWarnings("unchecked") @@ -59,7 +59,8 @@ public abstract class JabawsMsaInterfaceAlignCalcWorker extends } public JabawsMsaInterfaceAlignCalcWorker(Jws2Instance service, - AlignFrame alignFrame, WsParamSetI preset, List paramset) + AlignFrame alignFrame, WsParamSetI preset, + List paramset) { this(alignFrame.getCurrentView(), alignFrame.alignPanel); this.guiProgress = alignFrame; @@ -129,10 +130,8 @@ public abstract class JabawsMsaInterfaceAlignCalcWorker extends rslt = msaservice.customAlign(seqs, getJabaArguments()); } catch (WrongParameterException x) { - throw new JobSubmissionException( - MessageManager - .getString("exception.jobsubmission_invalid_params_set"), - x); + throw new JobSubmissionException(MessageManager.getString( + "exception.jobsubmission_invalid_params_set"), x); } } return rslt;