X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2FJws2Discoverer.java;h=30c1cb7e4811d3d1b8e21a6a836a6a8a3245150e;hb=refs%2Fheads%2Fspike%2FJAL-3622_Scanner_swingjs_J212_merge;hp=0782d57dba94f575044570955770a7de87bcf303;hpb=2f4f1d8fb6878271b64f327bc58c895f458137af;p=jalview.git
diff --git a/src/jalview/ws/jws2/Jws2Discoverer.java b/src/jalview/ws/jws2/Jws2Discoverer.java
index 0782d57..30c1cb7 100644
--- a/src/jalview/ws/jws2/Jws2Discoverer.java
+++ b/src/jalview/ws/jws2/Jws2Discoverer.java
@@ -1,50 +1,46 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.ws.jws2;
import jalview.bin.Cache;
import jalview.gui.AlignFrame;
-import jalview.gui.Desktop;
-import jalview.gui.JvSwingUtils;
-import jalview.ws.WSMenuEntryProviderI;
+import jalview.util.MessageManager;
+import jalview.ws.WSDiscovererI;
+import jalview.ws.api.ServiceWithParameters;
import jalview.ws.jws2.jabaws2.Jws2Instance;
import jalview.ws.params.ParamDatastoreI;
-import java.awt.Color;
-import java.awt.event.ActionEvent;
-import java.awt.event.ActionListener;
import java.beans.PropertyChangeEvent;
import java.beans.PropertyChangeListener;
+import java.beans.PropertyChangeSupport;
+import java.net.MalformedURLException;
import java.net.URL;
import java.util.ArrayList;
-import java.util.Arrays;
-import java.util.HashMap;
import java.util.HashSet;
-import java.util.Hashtable;
import java.util.List;
-import java.util.Map;
import java.util.Set;
import java.util.StringTokenizer;
import java.util.Vector;
import javax.swing.JMenu;
-import javax.swing.JMenuItem;
import compbio.ws.client.Services;
@@ -55,11 +51,55 @@ import compbio.ws.client.Services;
* @author JimP
*
*/
-public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
+public class Jws2Discoverer implements WSDiscovererI, Runnable
{
- private java.beans.PropertyChangeSupport changeSupport = new java.beans.PropertyChangeSupport(
+ public static final String COMPBIO_JABAWS = "http://www.compbio.dundee.ac.uk/jabaws";
+
+ /*
+ * the .jalview_properties entry for JWS2 URLS
+ */
+ private final static String JWS2HOSTURLS = "JWS2HOSTURLS";
+
+ /*
+ * Singleton instance
+ */
+ private static Jws2Discoverer discoverer;
+
+ /*
+ * Override for testing only
+ */
+ private static List testUrls = null;
+
+ // preferred url has precedence over others
+ private String preferredUrl;
+
+ private PropertyChangeSupport changeSupport = new PropertyChangeSupport(
this);
+ private Vector invalidServiceUrls = null;
+
+ private Vector urlsWithoutServices = null;
+
+ private Vector validServiceUrls = null;
+
+ private volatile boolean running = false;
+
+ private volatile boolean aborted = false;
+
+ private Thread oldthread = null;
+
+ /**
+ * holds list of services.
+ */
+ protected Vector services;
+
+ /**
+ * Private constructor enforces use of singleton via getDiscoverer()
+ */
+ private Jws2Discoverer()
+ {
+ }
+
/**
* change listeners are notified of "services" property changes
*
@@ -84,8 +124,6 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
changeSupport.removePropertyChangeListener(listener);
}
- boolean running = false, aborted = false;
-
/**
* @return the aborted
*/
@@ -103,8 +141,7 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
this.aborted = aborted;
}
- Thread oldthread = null;
-
+ @Override
public void run()
{
@@ -118,36 +155,38 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
{
try
{
- Cache.log
- .debug("Waiting around for old discovery thread to finish.");
+ Cache.log.debug(
+ "Waiting around for old discovery thread to finish.");
// wait around until old discoverer dies
Thread.sleep(100);
} catch (Exception e)
{
}
}
+ aborted = false;
Cache.log.debug("Old discovery thread has finished.");
}
running = true;
-
+
// first set up exclusion list if needed
- final Set ignoredServices = new HashSet();
- for (String ignored:jalview.bin.Cache.getDefault("IGNORED_JABAWS_SERVICETYPES", Services.JpredWS.toString()).split("\\|"))
+ final Set ignoredServices = new HashSet<>();
+ for (String ignored : Cache
+ .getDefault("IGNORED_JABAWS_SERVICETYPES", "").split("\\|"))
{
ignoredServices.add(ignored);
}
-
- changeSupport.firePropertyChange("services", services, new Vector());
+ changeSupport.firePropertyChange("services", services,
+ new Vector());
oldthread = Thread.currentThread();
try
{
- Class foo = getClass().getClassLoader().loadClass(
- "compbio.ws.client.Jws2Client");
+ Class foo = getClass().getClassLoader()
+ .loadClass("compbio.ws.client.Jws2Client");
} catch (ClassNotFoundException e)
{
- System.err
- .println("Not enabling JABA Webservices : client jar is not available."
+ System.err.println(
+ "Not enabling JABA Webservices : client jar is not available."
+ "\nPlease check that your webstart JNLP file is up to date!");
running = false;
return;
@@ -169,12 +208,12 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
{
validServiceUrls.removeAllElements();
}
- ArrayList svctypes = new ArrayList();
+ ArrayList svctypes = new ArrayList<>();
- List qrys = new ArrayList();
- for (final String jwsservers : getServiceUrls())
+ List qrys = new ArrayList<>();
+ for (final String jwsserver : getServiceUrls())
{
- JabaWsServerQuery squery = new JabaWsServerQuery(this, jwsservers);
+ JabaWsServerQuery squery = new JabaWsServerQuery(this, jwsserver);
if (svctypes.size() == 0)
{
// TODO: remove this ugly hack to get Canonical JABA service ordering
@@ -201,17 +240,17 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
} catch (Exception e)
{
}
- ;
for (JabaWsServerQuery squery : qrys)
{
- if (squery.isRunning()){
- finished=false;
+ if (squery.isRunning())
+ {
+ finished = false;
}
}
if (aborted)
{
- Cache.log.debug("Aborting " + qrys.size()
- + " JABAWS discovery threads.");
+ Cache.log.debug(
+ "Aborting " + qrys.size() + " JABAWS discovery threads.");
for (JabaWsServerQuery squery : qrys)
{
squery.setQuit(true);
@@ -221,25 +260,25 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
if (!aborted)
{
// resort services according to order found in jabaws service list
- // also ensure servics for each host are ordered in same way.
+ // also ensure services for each host are ordered in same way.
if (services != null && services.size() > 0)
{
Jws2Instance[] svcs = new Jws2Instance[services.size()];
int[] spos = new int[services.size()];
int ipos = 0;
- Vector svcUrls = getServiceUrls();
+ List svcUrls = getServiceUrls();
for (Jws2Instance svc : services)
{
svcs[ipos] = svc;
- spos[ipos++] = 1000 * svcUrls.indexOf(svc.getHost()) + 1
- + svctypes.indexOf(svc.serviceType);
+ spos[ipos++] = 1000 * svcUrls.indexOf(svc.getHostURL()) + 1
+ + svctypes.indexOf(svc.getName());
}
jalview.util.QuickSort.sort(spos, svcs);
- services = new Vector();
+ services = new Vector<>();
for (Jws2Instance svc : svcs)
{
- if (!ignoredServices.contains(svc.serviceType))
+ if (!ignoredServices.contains(svc.getName()))
{
services.add(svc);
}
@@ -248,7 +287,8 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
}
oldthread = null;
running = false;
- changeSupport.firePropertyChange("services", new Vector(), services);
+ changeSupport.firePropertyChange("services", new Vector(),
+ services);
}
/**
@@ -262,10 +302,10 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
{
if (services == null)
{
- services = new Vector();
+ services = new Vector<>();
}
- System.out.println("Discovered service: " + jwsservers + " "
- + service.toString());
+ System.out.println(
+ "Discovered service: " + jwsservers + " " + service.toString());
// Jws2Instance service = new Jws2Instance(jwsservers, srv.toString(),
// service2);
@@ -279,278 +319,55 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
service.hasParameters();
if (validServiceUrls == null)
{
- validServiceUrls = new Vector();
+ validServiceUrls = new Vector<>();
}
validServiceUrls.add(jwsservers);
}
/**
- * holds list of services.
- */
- protected Vector services;
-
- /**
* attach all available web services to the appropriate submenu in the given
* JMenu
*/
+ @Override
public void attachWSMenuEntry(JMenu wsmenu, final AlignFrame alignFrame)
{
+ if (running || services == null || services.size() == 0)
+ {
+ return;
+ }
// dynamically regenerate service list.
populateWSMenuEntry(wsmenu, alignFrame, null);
}
- private boolean isRecalculable(String action)
- {
- return (action != null && action.equalsIgnoreCase("conservation"));
- }
-
private void populateWSMenuEntry(JMenu jws2al,
final AlignFrame alignFrame, String typeFilter)
{
- if (running || services == null || services.size() == 0)
- {
- return;
- }
- boolean byhost = Cache.getDefault("WSMENU_BYHOST", false), bytype = Cache
- .getDefault("WSMENU_BYTYPE", false);
- /**
- * eventually, JWS2 services will appear under the same align/etc submenus.
- * for moment we keep them separate.
- */
- JMenu atpoint;
- List enumerableServices = new ArrayList();
- // jws2al.removeAll();
- Map preferredHosts = new HashMap();
- Map> alternates = new HashMap>();
- for (Jws2Instance service : services.toArray(new Jws2Instance[0]))
- {
- if (!isRecalculable(service.action))
- {
- // add 'one shot' services to be displayed using the classic menu
- // structure
- enumerableServices.add(service);
- }
- else
- {
- if (!preferredHosts.containsKey(service.serviceType))
- {
- Jws2Instance preferredInstance = getPreferredServiceFor(
- alignFrame, service.serviceType);
- if (preferredInstance != null)
- {
- preferredHosts.put(service.serviceType, preferredInstance);
- }
- else
- {
- preferredHosts.put(service.serviceType, service);
- }
- }
- List ph = alternates.get(service.serviceType);
- if (preferredHosts.get(service.serviceType) != service)
- {
- if (ph == null)
- {
- ph = new ArrayList();
- }
- ph.add(service);
- alternates.put(service.serviceType, ph);
- }
- }
-
- }
-
- // create GUI element for classic services
- addEnumeratedServices(jws2al, alignFrame, enumerableServices);
- // and the instantaneous services
- for (final Jws2Instance service : preferredHosts.values())
- {
- atpoint = JvSwingUtils.findOrCreateMenu(jws2al, service.action);
- JMenuItem hitm;
- if (atpoint.getItemCount() > 1)
- {
- // previous service of this type already present
- atpoint.addSeparator();
- }
- atpoint.add(hitm = new JMenuItem(service.getHost()));
- hitm.setForeground(Color.blue);
- hitm.addActionListener(new ActionListener()
- {
-
- @Override
- public void actionPerformed(ActionEvent e)
- {
- Desktop.showUrl(service.getHost());
- }
- });
- hitm.setToolTipText(JvSwingUtils
- .wrapTooltip("Opens the JABAWS server's homepage in web browser"));
-
- service.attachWSMenuEntry(atpoint, alignFrame);
- if (alternates.containsKey(service.serviceType))
- {
- atpoint.add(hitm = new JMenu("Switch server"));
- hitm.setToolTipText(JvSwingUtils
- .wrapTooltip("Choose a server for running this service"));
- for (final Jws2Instance sv : alternates.get(service.serviceType))
- {
- JMenuItem itm;
- hitm.add(itm = new JMenuItem(sv.getHost()));
- itm.setForeground(Color.blue);
- itm.addActionListener(new ActionListener()
- {
-
- @Override
- public void actionPerformed(ActionEvent arg0)
- {
- new Thread(new Runnable()
- {
- public void run()
- {
- setPreferredServiceFor(alignFrame, sv.serviceType,
- sv.action, sv);
- changeSupport.firePropertyChange("services",
- new Vector(), services);
- };
- }).start();
-
- }
- });
- }
- /*
- * hitm.addActionListener(new ActionListener() {
- *
- * @Override public void actionPerformed(ActionEvent arg0) { new
- * Thread(new Runnable() {
- *
- * @Override public void run() { new SetPreferredServer(alignFrame,
- * service.serviceType, service.action); } }).start(); } });
- */
- }
- }
+ PreferredServiceRegistry.getRegistry().populateWSMenuEntry(
+ getServices(),
+ changeSupport, jws2al,
+ alignFrame, typeFilter);
}
/**
- * add services using the Java 2.5/2.6/2.7 system which optionally creates
- * submenus to index by host and service program type
+ *
+ * @param args
+ * @j2sIgnore
*/
- private void addEnumeratedServices(final JMenu jws2al,
- final AlignFrame alignFrame, List enumerableServices)
- {
- boolean byhost = Cache.getDefault("WSMENU_BYHOST", false), bytype = Cache
- .getDefault("WSMENU_BYTYPE", false);
- /**
- * eventually, JWS2 services will appear under the same align/etc submenus.
- * for moment we keep them separate.
- */
- JMenu atpoint;
- MsaWSClient msacl = new MsaWSClient();
- List hostLabels = new ArrayList();
- Hashtable lasthostFor = new Hashtable();
- Hashtable> hosts = new Hashtable>();
- ArrayList hostlist = new ArrayList();
- for (Jws2Instance service : enumerableServices)
- {
- ArrayList hostservices = hosts.get(service.getHost());
- if (hostservices == null)
- {
- hosts.put(service.getHost(),
- hostservices = new ArrayList());
- hostlist.add(service.getHost());
- }
- hostservices.add(service);
- }
- // now add hosts in order of the given array
- for (String host : hostlist)
- {
- Jws2Instance orderedsvcs[] = hosts.get(host).toArray(
- new Jws2Instance[1]);
- String sortbytype[] = new String[orderedsvcs.length];
- for (int i = 0; i < sortbytype.length; i++)
- {
- sortbytype[i] = orderedsvcs[i].serviceType;
- }
- jalview.util.QuickSort.sort(sortbytype, orderedsvcs);
- for (final Jws2Instance service : orderedsvcs)
- {
- atpoint = JvSwingUtils.findOrCreateMenu(jws2al, service.action);
- String type = service.serviceType;
- if (byhost)
- {
- atpoint = JvSwingUtils.findOrCreateMenu(atpoint, host);
- if (atpoint.getToolTipText() == null)
- {
- atpoint.setToolTipText("Services at " + host);
- }
- }
- if (bytype)
- {
- atpoint = JvSwingUtils.findOrCreateMenu(atpoint, type);
- if (atpoint.getToolTipText() == null)
- {
- atpoint.setToolTipText(service.getActionText());
- }
- }
- if (!byhost
- && !hostLabels.contains(host + service.serviceType
- + service.getActionText()))
- // !hostLabels.contains(host + (bytype ?
- // service.serviceType+service.getActionText() : "")))
- {
- // add a marker indicating where this service is hosted
- // relies on services from the same host being listed in a
- // contiguous
- // group
- JMenuItem hitm;
- if (hostLabels.contains(host))
- {
- atpoint.addSeparator();
- }
- else
- {
- hostLabels.add(host);
- }
- if (lasthostFor.get(service.action) == null
- || !lasthostFor.get(service.action).equals(host))
- {
- atpoint.add(hitm = new JMenuItem(host));
- hitm.setForeground(Color.blue);
- hitm.addActionListener(new ActionListener()
- {
-
- @Override
- public void actionPerformed(ActionEvent e)
- {
- Desktop.showUrl(service.getHost());
- }
- });
- hitm.setToolTipText(JvSwingUtils
- .wrapTooltip("Opens the JABAWS server's homepage in web browser"));
- lasthostFor.put(service.action, host);
- }
- hostLabels.add(host + service.serviceType
- + service.getActionText());
- }
-
- service.attachWSMenuEntry(atpoint, alignFrame);
- }
- }
- }
-
public static void main(String[] args)
{
if (args.length > 0)
{
- testUrls = new Vector();
+ testUrls = new ArrayList<>();
for (String url : args)
{
testUrls.add(url);
}
- ;
}
- Thread runner = getDiscoverer().startDiscoverer(
- new PropertyChangeListener()
+ Thread runner = getDiscoverer()
+ .startDiscoverer(new PropertyChangeListener()
{
+ @Override
public void propertyChange(PropertyChangeEvent evt)
{
if (getDiscoverer().services != null)
@@ -558,12 +375,12 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
System.out.println("Changesupport: There are now "
+ getDiscoverer().services.size() + " services");
int i = 1;
- for (Jws2Instance instance : getDiscoverer().services)
+ for (ServiceWithParameters instance : getDiscoverer().services)
{
System.out.println("Service " + i++ + " "
+ instance.getClass() + "@"
- + instance.getHost() + ": "
- + instance.getActionText());
+ + instance.getHostURL()
+ + ": " + instance.getActionText());
}
}
@@ -577,7 +394,6 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
} catch (InterruptedException e)
{
}
- ;
}
try
{
@@ -587,8 +403,11 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
}
}
- private static Jws2Discoverer discoverer;
-
+ /**
+ * Returns the singleton instance of this class.
+ *
+ * @return
+ */
public static Jws2Discoverer getDiscoverer()
{
if (discoverer == null)
@@ -598,35 +417,32 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
return discoverer;
}
+ @Override
public boolean hasServices()
{
- // TODO Auto-generated method stub
return !running && services != null && services.size() > 0;
}
+ @Override
public boolean isRunning()
{
return running;
}
- /**
- * the jalview .properties entry for JWS2 URLS
- */
- final static String JWS2HOSTURLS = "JWS2HOSTURLS";
-
- public static void setServiceUrls(Vector urls)
+ @Override
+ public void setServiceUrls(List wsUrls)
{
- if (urls != null)
+ if (wsUrls != null && !wsUrls.isEmpty())
{
- StringBuffer urlbuffer = new StringBuffer();
+ StringBuilder urls = new StringBuilder(128);
String sep = "";
- for (String url : urls)
+ for (String url : wsUrls)
{
- urlbuffer.append(sep);
- urlbuffer.append(url);
+ urls.append(sep);
+ urls.append(url);
sep = ",";
}
- Cache.setProperty(JWS2HOSTURLS, urlbuffer.toString());
+ Cache.setProperty(JWS2HOSTURLS, urls.toString());
}
else
{
@@ -634,18 +450,28 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
}
}
- private static Vector testUrls = null;
-
- public static Vector getServiceUrls()
+ /**
+ * Returns web service URLs, in the order in which they should be tried (or an
+ * empty list).
+ *
+ * @return
+ */
+ @Override
+ public List getServiceUrls()
{
if (testUrls != null)
{
// return test urls, if there are any, instead of touching cache
return testUrls;
}
- String surls = Cache.getDefault(JWS2HOSTURLS,
- "http://www.compbio.dundee.ac.uk/jabaws");
- Vector urls = new Vector();
+ List urls = new ArrayList<>();
+
+ if (this.preferredUrl != null)
+ {
+ urls.add(preferredUrl);
+ }
+
+ String surls = Cache.getDefault(JWS2HOSTURLS, COMPBIO_JABAWS);
try
{
StringTokenizer st = new StringTokenizer(surls, ",");
@@ -654,46 +480,41 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
String url = null;
try
{
- java.net.URL u = new java.net.URL(url = st.nextToken());
+ url = st.nextToken();
+ new URL(url);
if (!urls.contains(url))
{
urls.add(url);
}
else
{
- jalview.bin.Cache.log.info("Ignoring duplicate url in "
+ Cache.log.warn("Ignoring duplicate url " + url + " in "
+ JWS2HOSTURLS + " list");
}
- } catch (Exception ex)
+ } catch (MalformedURLException ex)
{
- jalview.bin.Cache.log
- .warn("Problem whilst trying to make a URL from '"
- + ((url != null) ? url : "") + "'");
- jalview.bin.Cache.log
- .warn("This was probably due to a malformed comma separated list"
- + " in the "
- + JWS2HOSTURLS
+ Cache.log.warn("Problem whilst trying to make a URL from '"
+ + ((url != null) ? url : "") + "'");
+ Cache.log.warn(
+ "This was probably due to a malformed comma separated list"
+ + " in the " + JWS2HOSTURLS
+ " entry of $(HOME)/.jalview_properties)");
- jalview.bin.Cache.log.debug("Exception was ", ex);
+ Cache.log.debug("Exception was ", ex);
}
}
} catch (Exception ex)
{
- jalview.bin.Cache.log.warn(
- "Error parsing comma separated list of urls in "
- + JWS2HOSTURLS + " preference.", ex);
+ Cache.log.warn("Error parsing comma separated list of urls in "
+ + JWS2HOSTURLS + " preference.", ex);
}
- if (urls.size() >= 0)
- {
- return urls;
- }
- return null;
+ return urls;
}
- public Vector getServices()
+ @Override
+ public Vector getServices()
{
- return (services == null) ? new Vector()
- : new Vector(services);
+ return (services == null) ? new Vector<>()
+ : new Vector<>(services);
}
/**
@@ -702,12 +523,14 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
* @param foo
* @return
*/
- public static boolean testServiceUrl(URL foo)
+ @Override
+ public boolean testServiceUrl(URL foo)
{
try
{
- compbio.ws.client.WSTester.main(new String[]
- { "-h=" + foo.toString() });
+ compbio.ws.client.WSTester
+ .main(new String[]
+ { "-h=" + foo.toString() });
} catch (Exception e)
{
e.printStackTrace();
@@ -725,6 +548,22 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
return true;
}
+ public boolean restart()
+ {
+ synchronized (this)
+ {
+ if (running)
+ {
+ aborted = true;
+ }
+ else
+ {
+ running = true;
+ }
+ return aborted;
+ }
+ }
+
/**
* Start a fresh discovery thread and notify the given object when we're
* finished. Any known existing threads will be killed before this one is
@@ -733,8 +572,19 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
* @param changeSupport2
* @return new thread
*/
+ @Override
public Thread startDiscoverer(PropertyChangeListener changeSupport2)
{
+ /* if (restart())
+ {
+ return;
+ }
+ else
+ {
+ Thread thr = new Thread(this);
+ thr.start();
+ }
+ */
if (isRunning())
{
setAborted(true);
@@ -745,9 +595,6 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
return thr;
}
- Vector invalidServiceUrls = null, urlsWithoutServices = null,
- validServiceUrls = null;
-
/**
* @return the invalidServiceUrls
*/
@@ -774,11 +621,11 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
{
if (urlsWithoutServices == null)
{
- urlsWithoutServices = new Vector();
+ urlsWithoutServices = new Vector<>();
}
- if ((invalidServiceUrls == null || !invalidServiceUrls
- .contains(jwsservers))
+ if ((invalidServiceUrls == null
+ || !invalidServiceUrls.contains(jwsservers))
&& !urlsWithoutServices.contains(jwsservers))
{
urlsWithoutServices.add(jwsservers);
@@ -794,7 +641,7 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
{
if (invalidServiceUrls == null)
{
- invalidServiceUrls = new Vector();
+ invalidServiceUrls = new Vector<>();
}
if (!invalidServiceUrls.contains(jwsservers))
{
@@ -807,6 +654,7 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
* @return a human readable report of any problems with the service URLs used
* for discovery
*/
+ @Override
public String getErrorMessages()
{
if (!isRunning() && !isAborted())
@@ -816,7 +664,8 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
if (getInvalidServiceUrls() != null
&& getInvalidServiceUrls().size() > 0)
{
- ermsg.append("URLs that could not be contacted: \n");
+ ermsg.append(MessageManager.getString("warn.urls_not_contacted")
+ + ": \n");
for (String svcurl : getInvalidServiceUrls())
{
if (list)
@@ -832,7 +681,8 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
if (getUrlsWithoutServices() != null
&& getUrlsWithoutServices().size() > 0)
{
- ermsg.append("URLs without any JABA Services : \n");
+ ermsg.append(
+ MessageManager.getString("warn.urls_no_jaba") + ": \n");
for (String svcurl : getUrlsWithoutServices())
{
if (list)
@@ -853,125 +703,38 @@ public class Jws2Discoverer implements Runnable, WSMenuEntryProviderI
return null;
}
+ @Override
public int getServerStatusFor(String url)
{
if (validServiceUrls != null && validServiceUrls.contains(url))
{
- return 1;
+ return STATUS_OK;
}
if (urlsWithoutServices != null && urlsWithoutServices.contains(url))
- return 0;
- if (invalidServiceUrls != null && invalidServiceUrls.contains(url))
{
- return -1;
+ return STATUS_NO_SERVICES;
}
- return -2;
- }
-
- /**
- * pick the user's preferred service based on a set of URLs (jaba server
- * locations) and service URIs (specifying version and service interface
- * class)
- *
- * @param serviceURL
- * @return null or best match for given uri/ls.
- */
- public Jws2Instance getPreferredServiceFor(String[] serviceURLs)
- {
- HashSet urls = new HashSet();
- urls.addAll(Arrays.asList(serviceURLs));
- Jws2Instance match = null;
- if (services != null)
+ if (invalidServiceUrls != null && invalidServiceUrls.contains(url))
{
- for (Jws2Instance svc : services)
- {
- if (urls.contains(svc.getServiceTypeURI()))
- {
- if (match == null)
- {
- // for moment we always pick service from server ordered first in
- // user's preferences
- match = svc;
- }
- if (urls.contains(svc.getUri()))
- {
- // stop and return - we've matched type URI and URI for service
- // endpoint
- return svc;
- }
- }
- }
+ return STATUS_INVALID;
}
- return match;
+ return STATUS_UNKNOWN;
}
- Map> preferredServiceMap = new HashMap>();;
-
/**
- * get current preferred service of the given type, or global default
+ * Set a URL to try before any others. For use with command-line parameter to
+ * configure a local Jabaws installation without the need to add to property
+ * files.
*
- * @param af
- * null or a specific alignFrame
- * @param serviceType
- * Jws2Instance.serviceType for service
- * @return null if no service of this type is available, the preferred service
- * for the serviceType and af if specified and if defined.
+ * @param value
+ * @throws MalformedURLException
*/
- public Jws2Instance getPreferredServiceFor(AlignFrame af,
- String serviceType)
- {
- String serviceurl = null;
- synchronized (preferredServiceMap)
- {
- String afid = (af == null) ? "" : af.getViewport().getSequenceSetId();
- Map prefmap = preferredServiceMap.get(afid);
- if (afid.length() > 0 && prefmap == null)
- {
- // recover global setting, if any
- prefmap = preferredServiceMap.get("");
- }
- if (prefmap != null)
- {
- serviceurl = prefmap.get(serviceType);
- }
-
- }
- Jws2Instance response = null;
- for (Jws2Instance svc : services)
- {
- if (svc.serviceType.equals(serviceType))
- {
- if (serviceurl == null || serviceurl.equals(svc.getHost()))
- {
- response = svc;
- break;
- }
- }
- }
- return response;
- }
-
- public void setPreferredServiceFor(AlignFrame af, String serviceType,
- String serviceAction, Jws2Instance selectedServer)
+ public void setPreferredUrl(String value) throws MalformedURLException
{
- String afid = (af == null) ? "" : af.getViewport().getSequenceSetId();
- if (preferredServiceMap == null)
- {
- preferredServiceMap = new HashMap>();
- }
- Map prefmap = preferredServiceMap.get(afid);
- if (prefmap == null)
+ if (value != null && value.trim().length() > 0)
{
- prefmap = new HashMap();
- preferredServiceMap.put(afid, prefmap);
+ new URL(value);
+ preferredUrl = value;
}
- prefmap.put(serviceType, selectedServer.getHost());
- prefmap.put(serviceAction, selectedServer.getHost());
- }
-
- public void setPreferredServiceFor(String serviceType,
- String serviceAction, Jws2Instance selectedServer)
- {
- setPreferredServiceFor(null, serviceType, serviceAction, selectedServer);
}
}