X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2FParameterUtils.java;h=be904585c0b43fb528687589576abcccb1c25f7c;hb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;hp=c4e1ca8583ad332dec9df304a4d9b3091df48cc5;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git diff --git a/src/jalview/ws/jws2/ParameterUtils.java b/src/jalview/ws/jws2/ParameterUtils.java index c4e1ca8..be90458 100644 --- a/src/jalview/ws/jws2/ParameterUtils.java +++ b/src/jalview/ws/jws2/ParameterUtils.java @@ -1,25 +1,24 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7) - * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1) + * Copyright (C) 2014 The Jalview Authors * * This file is part of Jalview. * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * + * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. */ package jalview.ws.jws2; -import java.io.BufferedReader; -import java.io.IOException; -import java.io.Reader; +import java.net.MalformedURLException; import java.util.ArrayList; import java.util.HashSet; import java.util.List; @@ -129,6 +128,7 @@ public class ParameterUtils { copy.setName(option.getName()); copy.setDescription(option.getDescription()); + copy.setBasicURL(option.getBasicURL()); copy.setFurtherDetails(option.getFurtherDetails()); copy.setRequired(option.isRequired()); List names = option.getOptionNames();