X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2FSequenceAnnotationWSClient.java;h=2af31bb83f71ca848ab577545ab091e56a62ceea;hb=37de9310bec3501cbc6381e0c3dcb282fcaad812;hp=397667886c96e8a2355d9c0cf0a04a30f4ecbcdc;hpb=057f733ab390518a3641f1dedebd36c028bf03d6;p=jalview.git

diff --git a/src/jalview/ws/jws2/SequenceAnnotationWSClient.java b/src/jalview/ws/jws2/SequenceAnnotationWSClient.java
index 3976678..2af31bb 100644
--- a/src/jalview/ws/jws2/SequenceAnnotationWSClient.java
+++ b/src/jalview/ws/jws2/SequenceAnnotationWSClient.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
- * Copyright (C) 2014 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -21,7 +21,6 @@
 package jalview.ws.jws2;
 
 import jalview.api.AlignCalcWorkerI;
-import jalview.bin.Cache;
 import jalview.gui.AlignFrame;
 import jalview.gui.Desktop;
 import jalview.gui.JvSwingUtils;
@@ -35,12 +34,8 @@ import java.awt.event.ActionEvent;
 import java.awt.event.ActionListener;
 import java.util.List;
 
-import javax.swing.JCheckBoxMenuItem;
 import javax.swing.JMenu;
 import javax.swing.JMenuItem;
-import javax.swing.JOptionPane;
-import javax.swing.event.MenuEvent;
-import javax.swing.event.MenuListener;
 
 /**
  * @author jprocter
@@ -98,15 +93,15 @@ public class SequenceAnnotationWSClient extends Jws2Client
         try
         {
           worker = (AbstractJabaCalcWorker) (clientClass
-                  .getConstructor(new Class[]
-                  { Jws2Instance.class, AlignFrame.class,
-                      WsParamSetI.class, List.class })
-                  .newInstance(new Object[]
-                  { sh, alignFrame, this.preset, paramset }));
+                  .getConstructor(new Class[] { Jws2Instance.class,
+                      AlignFrame.class, WsParamSetI.class, List.class })
+                  .newInstance(new Object[] { sh, alignFrame, this.preset,
+                      paramset }));
         } catch (Exception x)
         {
           x.printStackTrace();
-          throw new Error(MessageManager.getString("error.implementation_error"), x);
+          throw new Error(
+                  MessageManager.getString("error.implementation_error"), x);
         }
         alignFrame.getViewport().getCalcManager().registerWorker(worker);
         alignFrame.getViewport().getCalcManager().startWorker(worker);
@@ -127,7 +122,7 @@ public class SequenceAnnotationWSClient extends Jws2Client
         }
         // reinstate worker if it was blacklisted (might have happened due to
         // invalid parameters)
-        alignFrame.getViewport().getCalcManager().workerMayRun(worker);
+        alignFrame.getViewport().getCalcManager().enableWorker(worker);
         worker.updateParameters(this.preset, paramset);
       }
     }
@@ -176,8 +171,8 @@ public class SequenceAnnotationWSClient extends Jws2Client
             service.serviceType.length() - 2);
 
     JMenuItem annotservice = new JMenuItem(MessageManager.formatMessage(
-            "label.calcname_with_default_settings", new String[]
-            { calcName }));
+            "label.calcname_with_default_settings",
+            new String[] { calcName }));
     annotservice.addActionListener(new ActionListener()
     {
 
@@ -209,15 +204,20 @@ public class SequenceAnnotationWSClient extends Jws2Client
       List<WsParamSetI> presets = service.getParamStore().getPresets();
       if (presets != null && presets.size() > 0)
       {
-        JMenu presetlist = new JMenu(MessageManager.formatMessage("label.run_with_preset", new String[]{calcName}));
+        JMenu presetlist = new JMenu(MessageManager.formatMessage(
+                "label.run_with_preset", new String[] { calcName }));
 
         for (final WsParamSetI preset : presets)
         {
           final JMenuItem methodR = new JMenuItem(preset.getName());
-          methodR.setToolTipText(JvSwingUtils.wrapTooltip(true, "<strong>"
-                          + (preset.isModifiable() ? MessageManager.getString("label.user_preset")
-                                  : MessageManager.getString("label.service_preset")) + "</strong><br/>"
-                          + preset.getDescription()));
+          methodR.setToolTipText(JvSwingUtils.wrapTooltip(
+                  true,
+                  "<strong>"
+                          + (preset.isModifiable() ? MessageManager
+                                  .getString("label.user_preset")
+                                  : MessageManager
+                                          .getString("label.service_preset"))
+                          + "</strong><br/>" + preset.getDescription()));
           methodR.addActionListener(new ActionListener()
           {
             public void actionPerformed(ActionEvent e)
@@ -248,7 +248,9 @@ public class SequenceAnnotationWSClient extends Jws2Client
             Desktop.instance.showUrl(service.docUrl);
           }
         });
-        annotservice.setToolTipText(JvSwingUtils.wrapTooltip(true, MessageManager.formatMessage("label.view_service_doc_url", new String[]{service.docUrl,service.docUrl})));
+        annotservice.setToolTipText(JvSwingUtils.wrapTooltip(true,
+                MessageManager.formatMessage("label.view_service_doc_url",
+                        new String[] { service.docUrl, service.docUrl })));
         wsmenu.add(annotservice);
       }
     }