X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2Fdm%2FAAConSettings.java;h=997913e837bf801cedafe3741191e37dceb9dc73;hb=dbf124d82413368d7aba34f8e3d8e7ad25167dea;hp=708787ec2c411670594c9bbc412fdcd8d2186fed;hpb=3d0101179759ef157b088ea135423cd909512d9f;p=jalview.git diff --git a/src/jalview/ws/jws2/dm/AAConSettings.java b/src/jalview/ws/jws2/dm/AAConSettings.java index 708787e..997913e 100644 --- a/src/jalview/ws/jws2/dm/AAConSettings.java +++ b/src/jalview/ws/jws2/dm/AAConSettings.java @@ -21,6 +21,7 @@ package jalview.ws.jws2.dm; import jalview.util.MessageManager; +import jalview.ws.api.ServiceWithParameters; import jalview.ws.jws2.JabaParamStore; import jalview.ws.jws2.JabaPreset; import jalview.ws.jws2.ParameterUtils; @@ -42,16 +43,16 @@ import compbio.metadata.Option; */ public class AAConSettings extends jalview.ws.params.AutoCalcSetting { - Jws2Instance service; + ServiceWithParameters service; - public AAConSettings(boolean autoUpdate, Jws2Instance service, + public AAConSettings(boolean autoUpdate, ServiceWithParameters service2, WsParamSetI preset, List jobArgset) { super(preset, jobArgset, autoUpdate); - this.service = service; + this.service = service2; } - public Jws2Instance getService() + public ServiceWithParameters getService() { return service; } @@ -76,8 +77,8 @@ public class AAConSettings extends jalview.ws.params.AutoCalcSetting preset = pr; return; } - List oldargs = new ArrayList(), - newargs = new ArrayList(); + List oldargs = new ArrayList<>(), + newargs = new ArrayList<>(); oldargs.addAll(preset.getArguments()); // need to compare parameters for (ArgumentI newparg : pr.getArguments()) @@ -112,6 +113,7 @@ public class AAConSettings extends jalview.ws.params.AutoCalcSetting : JabaParamStore.getJwsArgsfromJaba(jobArgset); } + @Override public String getWsParamFile() { List