X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fjws2%2Fjabaws2%2FJws2Instance.java;h=0ac1df42b0e8655c6d96d6c540b7c5ef27afc267;hb=dfa04e77181fccfa6229ffef1591fc9c622d9b39;hp=09f4a48ce730803cb41d063f10172fb33d792c69;hpb=59d682209891099d46b960509907c79e3fb276fe;p=jalview.git

diff --git a/src/jalview/ws/jws2/jabaws2/Jws2Instance.java b/src/jalview/ws/jws2/jabaws2/Jws2Instance.java
index 09f4a48..0ac1df4 100644
--- a/src/jalview/ws/jws2/jabaws2/Jws2Instance.java
+++ b/src/jalview/ws/jws2/jabaws2/Jws2Instance.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.0b1)
+ * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -14,6 +14,7 @@
  * PURPOSE.  See the GNU General Public License for more details.
  * 
  * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.ws.jws2.jabaws2;
 
@@ -48,6 +49,14 @@ public class Jws2Instance
 
   public String docUrl;
 
+  /**
+   * 
+   * @param hosturl Service endpoint
+   * @param serviceType Category for this service's analysis
+   * @param action text describing their action that service performs (eg 'aligning', 'analysing')
+   * @param description Description from JABAWS registry
+   * @param service JABAWS registry ID for service
+   */
   public Jws2Instance(String hosturl, String serviceType, String action,
           String description, JABAService service)
   {
@@ -173,6 +182,8 @@ public class Jws2Instance
                         : null));
       } catch (Exception ex)
       {
+        System.err.println("Unexpected exception creating JabaParamStore.");
+        ex.printStackTrace();
       }
 
     }
@@ -222,4 +233,9 @@ public class Jws2Instance
   {
     return "java:" + serviceType;
   }
+  jalview.ws.uimodel.AlignAnalysisUIText aaui;
+  public jalview.ws.uimodel.AlignAnalysisUIText getAlignAnalysisUI()
+  {
+    return aaui;
+  }
 }