X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Frest%2FRestServiceDescription.java;h=6f304a92017414a7f2ad09db2cce208aaaeb1286;hb=e1cd94839128776e14e51ded3f3be2dcc7e72273;hp=7e7e3fa59c3c06e23f29e172a47e49013bd8fe9c;hpb=b57a02c25e335d033c97f8a6bacd6b54f62bd2b6;p=jalview.git

diff --git a/src/jalview/ws/rest/RestServiceDescription.java b/src/jalview/ws/rest/RestServiceDescription.java
index 7e7e3fa..6f304a9 100644
--- a/src/jalview/ws/rest/RestServiceDescription.java
+++ b/src/jalview/ws/rest/RestServiceDescription.java
@@ -1,31 +1,29 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2)
+ * Copyright (C) 2014 The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
  * Jalview is free software: you can redistribute it and/or
  * modify it under the terms of the GNU General Public License 
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- * 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
  * Jalview is distributed in the hope that it will be useful, but 
  * WITHOUT ANY WARRANTY; without even the implied warranty 
  * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
  * PURPOSE.  See the GNU General Public License for more details.
  * 
- * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package jalview.ws.rest;
 
 import jalview.datamodel.SequenceI;
-import jalview.io.packed.DataProvider;
-import jalview.io.packed.SimpleDataProvider;
 import jalview.io.packed.DataProvider.JvDataType;
-import jalview.util.GroupUrlLink.UrlStringTooLongException;
-import jalview.util.Platform;
 import jalview.ws.rest.params.Alignment;
 import jalview.ws.rest.params.AnnotationFile;
-import jalview.ws.rest.params.JobConstant;
 import jalview.ws.rest.params.SeqGroupIndexVector;
 
 import java.net.URL;
@@ -36,15 +34,9 @@ import java.util.List;
 import java.util.Map;
 import java.util.NoSuchElementException;
 import java.util.StringTokenizer;
-import java.util.Vector;
 import java.util.regex.Matcher;
 import java.util.regex.Pattern;
 
-import javax.swing.JViewport;
-
-import com.stevesoft.pat.Regex;
-import com.sun.org.apache.xml.internal.serialize.OutputFormat.DTD;
-
 public class RestServiceDescription
 {
   /**
@@ -884,100 +876,6 @@ public class RestServiceDescription
     return valid;
   }
 
-  public static void main(String argv[])
-  {
-    // test separator list
-    try
-    {
-      assert (separatorListToArray("foo=',',min='foo',max='1,2,3',fa=','",
-              ",").length == 4);
-      if (separatorListToArray("minsize='2', sep=','", ",").length == 2)
-      {
-        assert (false);
-      }
-
-    } catch (AssertionError x)
-    {
-      System.err.println("separatorListToArray is faulty.");
-    }
-    if (argv.length == 0)
-    {
-      if (!testRsdExchange("Test using default Shmmr service",
-              RestClient.makeShmmrRestClient().service))
-      {
-        System.err.println("default test failed.");
-      }
-      else
-      {
-        System.err.println("default test passed.");
-      }
-    }
-    else
-    {
-      int i = 0, p = 0;
-      for (String svc : argv)
-      {
-        p += testRsdExchange("Test " + (++i), svc) ? 1 : 0;
-      }
-      System.err.println("" + p + " out of " + i + " tests passed.");
-
-    }
-  }
-
-  private static boolean testRsdExchange(String desc, String servicestring)
-  {
-    try
-    {
-      RestServiceDescription newService = new RestServiceDescription(
-              servicestring);
-      if (!newService.isValid())
-      {
-        throw new Error("Failed to create service from '" + servicestring
-                + "'.\n" + newService.getInvalidMessage());
-      }
-      return testRsdExchange(desc, newService);
-    } catch (Throwable x)
-    {
-      System.err.println("Failed for service (" + desc + "): "
-              + servicestring);
-      x.printStackTrace();
-      return false;
-    }
-  }
-
-  private static boolean testRsdExchange(String desc,
-          RestServiceDescription service)
-  {
-    try
-    {
-      String fromservicetostring = service.toString();
-      RestServiceDescription newService = new RestServiceDescription(
-              fromservicetostring);
-      if (!newService.isValid())
-      {
-        throw new Error("Failed to create service from '"
-                + fromservicetostring + "'.\n"
-                + newService.getInvalidMessage());
-      }
-
-      if (!service.equals(newService))
-      {
-        System.err.println("Failed for service (" + desc + ").");
-        System.err.println("Original service and parsed service differ.");
-        System.err.println("Original: " + fromservicetostring);
-        System.err.println("Parsed  : " + newService.toString());
-        return false;
-      }
-    } catch (Throwable x)
-    {
-      System.err.println("Failed for service (" + desc + "): "
-              + service.toString());
-      x.printStackTrace();
-      return false;
-    }
-    return true;
-  }
-
   /**
    * covenience method to generate the id and sequence string vector from a set
    * of seuqences using each sequence's getName() and getSequenceAsString()