X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Frest%2Fparams%2FAnnotationFile.java;h=a8bf2d1e9c5d3818b01cf06c927f530d4a6c2550;hb=eb9c652416a69e6db0531e956dd2011012eac898;hp=8cd1b6807ab94cf63cd27b6cb7af30de9e8393d4;hpb=25aaaa87042b3f507ad4348120df7dd073182759;p=jalview.git diff --git a/src/jalview/ws/rest/params/AnnotationFile.java b/src/jalview/ws/rest/params/AnnotationFile.java index 8cd1b68..a8bf2d1 100644 --- a/src/jalview/ws/rest/params/AnnotationFile.java +++ b/src/jalview/ws/rest/params/AnnotationFile.java @@ -1,6 +1,6 @@ /* - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1) - * Copyright (C) 2014 The Jalview Authors + * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1) + * Copyright (C) 2015 The Jalview Authors * * This file is part of Jalview. * @@ -45,8 +45,7 @@ public class AnnotationFile extends InputType { public AnnotationFile() { - super(new Class[] - { AlignmentI.class }); + super(new Class[] { AlignmentI.class }); } /** @@ -112,8 +111,7 @@ public class AnnotationFile extends InputType if (tok.startsWith("format")) { - for (String fmt : new String[] - { CSVANNOT, JVANNOT }) + for (String fmt : new String[] { CSVANNOT, JVANNOT }) { if (val.equalsIgnoreCase(fmt)) { @@ -123,8 +121,7 @@ public class AnnotationFile extends InputType } warnings.append("Invalid annotation file format '" + val + "'. Must be one of ("); - for (String fmt : new String[] - { CSVANNOT, JVANNOT }) + for (String fmt : new String[] { CSVANNOT, JVANNOT }) { warnings.append(" " + fmt); } @@ -139,8 +136,8 @@ public class AnnotationFile extends InputType // TODO - consider disregarding base options here. List lst = getBaseOptions(); lst.add(new Option("format", "Alignment annotation upload format", - true, JVANNOT, format, Arrays.asList(new String[] - { JVANNOT, CSVANNOT }), null)); + true, JVANNOT, format, Arrays.asList(new String[] { JVANNOT, + CSVANNOT }), null)); return lst; } }