X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws%2Fseqfetcher%2FASequenceFetcher.java;h=8b6318488a7dc378da26844f5e253b35a7e1ed9d;hb=0e2054d29bc49351f000d478659dc3c4371b251c;hp=f449570e91c99c2d7bff0e8bdfb270afdbfd6bde;hpb=59d682209891099d46b960509907c79e3fb276fe;p=jalview.git
diff --git a/src/jalview/ws/seqfetcher/ASequenceFetcher.java b/src/jalview/ws/seqfetcher/ASequenceFetcher.java
index f449570..8b63184 100644
--- a/src/jalview/ws/seqfetcher/ASequenceFetcher.java
+++ b/src/jalview/ws/seqfetcher/ASequenceFetcher.java
@@ -1,6 +1,6 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
+ * Copyright (C) 2014 The Jalview Authors
*
* This file is part of Jalview.
*
@@ -14,6 +14,7 @@
* PURPOSE. See the GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package jalview.ws.seqfetcher;
@@ -23,7 +24,6 @@ import jalview.datamodel.SequenceI;
import jalview.util.DBRefUtils;
import java.util.ArrayList;
-import java.util.Collection;
import java.util.Enumeration;
import java.util.HashSet;
import java.util.Hashtable;
@@ -273,9 +273,10 @@ public class ASequenceFetcher
DbSourceProxy[] l = dblist.values().toArray(new DbSourceProxy[0]);
int i = 0;
String[] nm = new String[l.length];
+ // make sure standard dbs appear first, followed by reference das sources, followed by anything else.
for (DbSourceProxy s : l)
{
- nm[i++] = s.getDbName().toLowerCase();
+ nm[i++] = ""+s.getTier()+s.getDbName().toLowerCase();
}
jalview.util.QuickSort.sort(nm, l);
dbs = new ArrayList();