X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fws2%2Fgui%2FSearchServiceGuiHandler.java;h=a57db1de9c58662f10cc62e6417e083675ee1994;hb=5bf9dbf63ff6ea586fd92ca01b6b24be6b39421d;hp=49df4662b49f8c993d2a2b6a52ba8079b931fdc4;hpb=66f174b1f1371d93ef9bef55be4a99255efab305;p=jalview.git

diff --git a/src/jalview/ws2/gui/SearchServiceGuiHandler.java b/src/jalview/ws2/gui/SearchServiceGuiHandler.java
index 49df466..a57db1d 100644
--- a/src/jalview/ws2/gui/SearchServiceGuiHandler.java
+++ b/src/jalview/ws2/gui/SearchServiceGuiHandler.java
@@ -142,6 +142,12 @@ class SearchServiceGuiHandler implements TaskEventListener<AlignmentI>
       alnCpy.setDataset(result.getDataset());
       for (AlignmentAnnotation annotation : result.getAlignmentAnnotation())
         alnCpy.addAnnotation(new AlignmentAnnotation(annotation));
+      if (result.hasSeqrep())
+      {
+        int idx = result.findIndex(result.getSeqrep());
+        if (idx >= 0)
+          alnCpy.setSeqrep(alnCpy.getSequenceAt(idx));
+      }
       displayResultsNewFrame(alnCpy);
     });
     SwingUtilities.invokeLater(infoPanel::setResultsReady);