X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Fjalview%2FSequenceSet.java;fp=src%2Fjalview%2Fxml%2Fbinding%2Fjalview%2FSequenceSet.java;h=ed2c120ed33c57e853649293e7c670633eb01af7;hb=3659ecfe7bb17dd25a0a6b5c94a7d9dab4525136;hp=0c435d06dcbd6ef3955db9910c8961c042d4eb52;hpb=5d49f772d8dd53aba8907f37a244b00ed8f86a87;p=jalview.git

diff --git a/src/jalview/xml/binding/jalview/SequenceSet.java b/src/jalview/xml/binding/jalview/SequenceSet.java
index 0c435d0..ed2c120 100644
--- a/src/jalview/xml/binding/jalview/SequenceSet.java
+++ b/src/jalview/xml/binding/jalview/SequenceSet.java
@@ -1,8 +1,8 @@
 //
-// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 
-// See https://eclipse-ee4j.github.io/jaxb-ri 
+// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 
+// See <a href="http://java.sun.com/xml/jaxb">http://java.sun.com/xml/jaxb</a> 
 // Any modifications to this file will be lost upon recompilation of the source schema. 
-// Generated on: 2022.02.07 at 04:44:47 PM GMT 
+// Generated on: 2023.01.31 at 04:07:08 PM GMT 
 //
 
 
@@ -19,35 +19,35 @@ import javax.xml.bind.annotation.XmlType;
 
 
 /**
- * &lt;p&gt;Java class for anonymous complex type.
+ * <p>Java class for anonymous complex type.
  * 
- * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
+ * <p>The following schema fragment specifies the expected content contained within this class.
  * 
- * &lt;pre&gt;
- * &amp;lt;complexType&amp;gt;
- *   &amp;lt;complexContent&amp;gt;
- *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
- *       &amp;lt;sequence&amp;gt;
- *         &amp;lt;element ref="{www.vamsas.ac.uk/jalview/version2}Sequence" maxOccurs="unbounded" minOccurs="0"/&amp;gt;
- *         &amp;lt;element ref="{www.vamsas.ac.uk/jalview/version2}Annotation" maxOccurs="unbounded" minOccurs="0"/&amp;gt;
- *         &amp;lt;element name="sequenceSetProperties" maxOccurs="unbounded" minOccurs="0"&amp;gt;
- *           &amp;lt;complexType&amp;gt;
- *             &amp;lt;complexContent&amp;gt;
- *               &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
- *                 &amp;lt;attribute name="key" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
- *                 &amp;lt;attribute name="value" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
- *               &amp;lt;/restriction&amp;gt;
- *             &amp;lt;/complexContent&amp;gt;
- *           &amp;lt;/complexType&amp;gt;
- *         &amp;lt;/element&amp;gt;
- *         &amp;lt;element ref="{www.vamsas.ac.uk/jalview/version2}AlcodonFrame" maxOccurs="unbounded" minOccurs="0"/&amp;gt;
- *       &amp;lt;/sequence&amp;gt;
- *       &amp;lt;attribute name="gapChar" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
- *       &amp;lt;attribute name="datasetId" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
- *     &amp;lt;/restriction&amp;gt;
- *   &amp;lt;/complexContent&amp;gt;
- * &amp;lt;/complexType&amp;gt;
- * &lt;/pre&gt;
+ * <pre>
+ * &lt;complexType>
+ *   &lt;complexContent>
+ *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *       &lt;sequence>
+ *         &lt;element ref="{www.vamsas.ac.uk/jalview/version2}Sequence" maxOccurs="unbounded" minOccurs="0"/>
+ *         &lt;element ref="{www.vamsas.ac.uk/jalview/version2}Annotation" maxOccurs="unbounded" minOccurs="0"/>
+ *         &lt;element name="sequenceSetProperties" maxOccurs="unbounded" minOccurs="0">
+ *           &lt;complexType>
+ *             &lt;complexContent>
+ *               &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                 &lt;attribute name="key" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *                 &lt;attribute name="value" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *               &lt;/restriction>
+ *             &lt;/complexContent>
+ *           &lt;/complexType>
+ *         &lt;/element>
+ *         &lt;element ref="{www.vamsas.ac.uk/jalview/version2}AlcodonFrame" maxOccurs="unbounded" minOccurs="0"/>
+ *       &lt;/sequence>
+ *       &lt;attribute name="gapChar" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *       &lt;attribute name="datasetId" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *     &lt;/restriction>
+ *   &lt;/complexContent>
+ * &lt;/complexType>
+ * </pre>
  * 
  * 
  */
@@ -76,20 +76,20 @@ public class SequenceSet {
     /**
      * Gets the value of the sequence property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the sequence property.
+     * This is why there is not a <CODE>set</CODE> method for the sequence property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getSequence().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link Sequence }
      * 
@@ -105,20 +105,20 @@ public class SequenceSet {
     /**
      * Gets the value of the annotation property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the annotation property.
+     * This is why there is not a <CODE>set</CODE> method for the annotation property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getAnnotation().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link Annotation }
      * 
@@ -134,20 +134,20 @@ public class SequenceSet {
     /**
      * Gets the value of the sequenceSetProperties property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the sequenceSetProperties property.
+     * This is why there is not a <CODE>set</CODE> method for the sequenceSetProperties property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getSequenceSetProperties().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link SequenceSet.SequenceSetProperties }
      * 
@@ -163,20 +163,20 @@ public class SequenceSet {
     /**
      * Gets the value of the alcodonFrame property.
      * 
-     * &lt;p&gt;
+     * <p>
      * This accessor method returns a reference to the live list,
      * not a snapshot. Therefore any modification you make to the
      * returned list will be present inside the JAXB object.
-     * This is why there is not a &lt;CODE&gt;set&lt;/CODE&gt; method for the alcodonFrame property.
+     * This is why there is not a <CODE>set</CODE> method for the alcodonFrame property.
      * 
-     * &lt;p&gt;
+     * <p>
      * For example, to add a new item, do as follows:
-     * &lt;pre&gt;
+     * <pre>
      *    getAlcodonFrame().add(newItem);
-     * &lt;/pre&gt;
+     * </pre>
      * 
      * 
-     * &lt;p&gt;
+     * <p>
      * Objects of the following type(s) are allowed in the list
      * {@link AlcodonFrame }
      * 
@@ -239,20 +239,20 @@ public class SequenceSet {
 
 
     /**
-     * &lt;p&gt;Java class for anonymous complex type.
-     * 
-     * &lt;p&gt;The following schema fragment specifies the expected content contained within this class.
-     * 
-     * &lt;pre&gt;
-     * &amp;lt;complexType&amp;gt;
-     *   &amp;lt;complexContent&amp;gt;
-     *     &amp;lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&amp;gt;
-     *       &amp;lt;attribute name="key" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
-     *       &amp;lt;attribute name="value" type="{http://www.w3.org/2001/XMLSchema}string" /&amp;gt;
-     *     &amp;lt;/restriction&amp;gt;
-     *   &amp;lt;/complexContent&amp;gt;
-     * &amp;lt;/complexType&amp;gt;
-     * &lt;/pre&gt;
+     * <p>Java class for anonymous complex type.
+     * 
+     * <p>The following schema fragment specifies the expected content contained within this class.
+     * 
+     * <pre>
+     * &lt;complexType>
+     *   &lt;complexContent>
+     *     &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       &lt;attribute name="key" type="{http://www.w3.org/2001/XMLSchema}string" />
+     *       &lt;attribute name="value" type="{http://www.w3.org/2001/XMLSchema}string" />
+     *     &lt;/restriction>
+     *   &lt;/complexContent>
+     * &lt;/complexType>
+     * </pre>
      * 
      * 
      */