X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FCommentType.java;h=72ca25cad2be53f3ea509fa71da668ba0d928493;hb=ee19482a42988b76fdca9d46065ce2ca14ea73c5;hp=2227f187bdd5359c99480e4e6f1a813255c949f1;hpb=7b32d373b60d0af55481cfd6d377b2cc1ec035c0;p=jalview.git diff --git a/src/jalview/xml/binding/uniprot/CommentType.java b/src/jalview/xml/binding/uniprot/CommentType.java index 2227f18..72ca25c 100644 --- a/src/jalview/xml/binding/uniprot/CommentType.java +++ b/src/jalview/xml/binding/uniprot/CommentType.java @@ -1,8 +1,8 @@ // -// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 -// See https://eclipse-ee4j.github.io/jaxb-ri +// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 +// See http://java.sun.com/xml/jaxb // Any modifications to this file will be lost upon recompilation of the source schema. -// Generated on: 2022.02.07 at 04:44:21 PM GMT +// Generated on: 2023.02.22 at 10:08:58 PM GMT // @@ -22,153 +22,153 @@ import javax.xml.bind.annotation.XmlType; * Describes different types of general annotations. * Equivalent to the flat file CC-line. * - * <p>Java class for commentType complex type. + *

Java class for commentType complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType name="commentType"&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="molecule" type="{http://uniprot.org/uniprot}moleculeType" minOccurs="0"/&gt; - * &lt;choice minOccurs="0"&gt; - * &lt;group ref="{http://uniprot.org/uniprot}bpcCommentGroup"/&gt; - * &lt;sequence&gt; - * &lt;element name="reaction" type="{http://uniprot.org/uniprot}reactionType"/&gt; - * &lt;element name="physiologicalReaction" type="{http://uniprot.org/uniprot}physiologicalReactionType" maxOccurs="2" minOccurs="0"/&gt; - * &lt;/sequence&gt; - * &lt;sequence&gt; - * &lt;element name="cofactor" type="{http://uniprot.org/uniprot}cofactorType" maxOccurs="unbounded"/&gt; - * &lt;/sequence&gt; - * &lt;sequence&gt; - * &lt;element name="subcellularLocation" type="{http://uniprot.org/uniprot}subcellularLocationType" maxOccurs="unbounded"/&gt; - * &lt;/sequence&gt; - * &lt;element name="conflict"&gt; - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="sequence" minOccurs="0"&gt; - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;attribute name="resource" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="EMBL-CDS"/&gt; - * &lt;enumeration value="EMBL"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * &lt;/element&gt; - * &lt;/sequence&gt; - * &lt;attribute name="type" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="frameshift"/&gt; - * &lt;enumeration value="erroneous initiation"/&gt; - * &lt;enumeration value="erroneous termination"/&gt; - * &lt;enumeration value="erroneous gene model prediction"/&gt; - * &lt;enumeration value="erroneous translation"/&gt; - * &lt;enumeration value="miscellaneous discrepancy"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * &lt;/element&gt; - * &lt;sequence&gt; - * &lt;element name="link" maxOccurs="unbounded" minOccurs="0"&gt; - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * &lt;/element&gt; - * &lt;/sequence&gt; - * &lt;sequence&gt; - * &lt;element name="event" type="{http://uniprot.org/uniprot}eventType" maxOccurs="4"/&gt; - * &lt;element name="isoform" type="{http://uniprot.org/uniprot}isoformType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;/sequence&gt; - * &lt;sequence&gt; - * &lt;element name="interactant" type="{http://uniprot.org/uniprot}interactantType" maxOccurs="2" minOccurs="2"/&gt; - * &lt;element name="organismsDiffer" type="{http://www.w3.org/2001/XMLSchema}boolean"/&gt; - * &lt;element name="experiments" type="{http://www.w3.org/2001/XMLSchema}int"/&gt; - * &lt;/sequence&gt; - * &lt;element name="disease"&gt; - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/&gt; - * &lt;element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/&gt; - * &lt;element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/&gt; - * &lt;element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/&gt; - * &lt;/sequence&gt; - * &lt;attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * &lt;/element&gt; - * &lt;/choice&gt; - * &lt;element name="location" type="{http://uniprot.org/uniprot}locationType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;/sequence&gt; - * &lt;attribute name="type" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="allergen"/&gt; - * &lt;enumeration value="alternative products"/&gt; - * &lt;enumeration value="biotechnology"/&gt; - * &lt;enumeration value="biophysicochemical properties"/&gt; - * &lt;enumeration value="catalytic activity"/&gt; - * &lt;enumeration value="caution"/&gt; - * &lt;enumeration value="cofactor"/&gt; - * &lt;enumeration value="developmental stage"/&gt; - * &lt;enumeration value="disease"/&gt; - * &lt;enumeration value="domain"/&gt; - * &lt;enumeration value="disruption phenotype"/&gt; - * &lt;enumeration value="activity regulation"/&gt; - * &lt;enumeration value="function"/&gt; - * &lt;enumeration value="induction"/&gt; - * &lt;enumeration value="miscellaneous"/&gt; - * &lt;enumeration value="pathway"/&gt; - * &lt;enumeration value="pharmaceutical"/&gt; - * &lt;enumeration value="polymorphism"/&gt; - * &lt;enumeration value="PTM"/&gt; - * &lt;enumeration value="RNA editing"/&gt; - * &lt;enumeration value="similarity"/&gt; - * &lt;enumeration value="subcellular location"/&gt; - * &lt;enumeration value="sequence caution"/&gt; - * &lt;enumeration value="subunit"/&gt; - * &lt;enumeration value="tissue specificity"/&gt; - * &lt;enumeration value="toxic dose"/&gt; - * &lt;enumeration value="online information"/&gt; - * &lt;enumeration value="mass spectrometry"/&gt; - * &lt;enumeration value="interaction"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="locationType" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="name" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="mass" type="{http://www.w3.org/2001/XMLSchema}float" /&gt; - * &lt;attribute name="error" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="method" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+ * <complexType name="commentType">
+ *   <complexContent>
+ *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *       <sequence>
+ *         <element name="molecule" type="{http://uniprot.org/uniprot}moleculeType" minOccurs="0"/>
+ *         <choice minOccurs="0">
+ *           <group ref="{http://uniprot.org/uniprot}bpcCommentGroup"/>
+ *           <sequence>
+ *             <element name="reaction" type="{http://uniprot.org/uniprot}reactionType"/>
+ *             <element name="physiologicalReaction" type="{http://uniprot.org/uniprot}physiologicalReactionType" maxOccurs="2" minOccurs="0"/>
+ *           </sequence>
+ *           <sequence>
+ *             <element name="cofactor" type="{http://uniprot.org/uniprot}cofactorType" maxOccurs="unbounded"/>
+ *           </sequence>
+ *           <sequence>
+ *             <element name="subcellularLocation" type="{http://uniprot.org/uniprot}subcellularLocationType" maxOccurs="unbounded"/>
+ *           </sequence>
+ *           <element name="conflict">
+ *             <complexType>
+ *               <complexContent>
+ *                 <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                   <sequence>
+ *                     <element name="sequence" minOccurs="0">
+ *                       <complexType>
+ *                         <complexContent>
+ *                           <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                             <attribute name="resource" use="required">
+ *                               <simpleType>
+ *                                 <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+ *                                   <enumeration value="EMBL-CDS"/>
+ *                                   <enumeration value="EMBL"/>
+ *                                 </restriction>
+ *                               </simpleType>
+ *                             </attribute>
+ *                             <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *                             <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" />
+ *                           </restriction>
+ *                         </complexContent>
+ *                       </complexType>
+ *                     </element>
+ *                   </sequence>
+ *                   <attribute name="type" use="required">
+ *                     <simpleType>
+ *                       <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+ *                         <enumeration value="frameshift"/>
+ *                         <enumeration value="erroneous initiation"/>
+ *                         <enumeration value="erroneous termination"/>
+ *                         <enumeration value="erroneous gene model prediction"/>
+ *                         <enumeration value="erroneous translation"/>
+ *                         <enumeration value="miscellaneous discrepancy"/>
+ *                       </restriction>
+ *                     </simpleType>
+ *                   </attribute>
+ *                   <attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *                 </restriction>
+ *               </complexContent>
+ *             </complexType>
+ *           </element>
+ *           <sequence>
+ *             <element name="link" maxOccurs="unbounded" minOccurs="0">
+ *               <complexType>
+ *                 <complexContent>
+ *                   <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                     <attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" />
+ *                   </restriction>
+ *                 </complexContent>
+ *               </complexType>
+ *             </element>
+ *           </sequence>
+ *           <sequence>
+ *             <element name="event" type="{http://uniprot.org/uniprot}eventType" maxOccurs="4"/>
+ *             <element name="isoform" type="{http://uniprot.org/uniprot}isoformType" maxOccurs="unbounded" minOccurs="0"/>
+ *           </sequence>
+ *           <sequence>
+ *             <element name="interactant" type="{http://uniprot.org/uniprot}interactantType" maxOccurs="2" minOccurs="2"/>
+ *             <element name="organismsDiffer" type="{http://www.w3.org/2001/XMLSchema}boolean"/>
+ *             <element name="experiments" type="{http://www.w3.org/2001/XMLSchema}int"/>
+ *           </sequence>
+ *           <element name="disease">
+ *             <complexType>
+ *               <complexContent>
+ *                 <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *                   <sequence>
+ *                     <element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/>
+ *                     <element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/>
+ *                     <element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/>
+ *                     <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/>
+ *                   </sequence>
+ *                   <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *                 </restriction>
+ *               </complexContent>
+ *             </complexType>
+ *           </element>
+ *         </choice>
+ *         <element name="location" type="{http://uniprot.org/uniprot}locationType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+ *       </sequence>
+ *       <attribute name="type" use="required">
+ *         <simpleType>
+ *           <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+ *             <enumeration value="allergen"/>
+ *             <enumeration value="alternative products"/>
+ *             <enumeration value="biotechnology"/>
+ *             <enumeration value="biophysicochemical properties"/>
+ *             <enumeration value="catalytic activity"/>
+ *             <enumeration value="caution"/>
+ *             <enumeration value="cofactor"/>
+ *             <enumeration value="developmental stage"/>
+ *             <enumeration value="disease"/>
+ *             <enumeration value="domain"/>
+ *             <enumeration value="disruption phenotype"/>
+ *             <enumeration value="activity regulation"/>
+ *             <enumeration value="function"/>
+ *             <enumeration value="induction"/>
+ *             <enumeration value="miscellaneous"/>
+ *             <enumeration value="pathway"/>
+ *             <enumeration value="pharmaceutical"/>
+ *             <enumeration value="polymorphism"/>
+ *             <enumeration value="PTM"/>
+ *             <enumeration value="RNA editing"/>
+ *             <enumeration value="similarity"/>
+ *             <enumeration value="subcellular location"/>
+ *             <enumeration value="sequence caution"/>
+ *             <enumeration value="subunit"/>
+ *             <enumeration value="tissue specificity"/>
+ *             <enumeration value="toxic dose"/>
+ *             <enumeration value="online information"/>
+ *             <enumeration value="mass spectrometry"/>
+ *             <enumeration value="interaction"/>
+ *           </restriction>
+ *         </simpleType>
+ *       </attribute>
+ *       <attribute name="locationType" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *       <attribute name="name" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *       <attribute name="mass" type="{http://www.w3.org/2001/XMLSchema}float" />
+ *       <attribute name="error" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *       <attribute name="method" type="{http://www.w3.org/2001/XMLSchema}string" />
+ *       <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ *     </restriction>
+ *   </complexContent>
+ * </complexType>
+ * 
* * */ @@ -404,20 +404,20 @@ public class CommentType { /** * Gets the value of the physiologicalReaction property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the physiologicalReaction property. + * This is why there is not a set method for the physiologicalReaction property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getPhysiologicalReaction().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link PhysiologicalReactionType } * @@ -433,20 +433,20 @@ public class CommentType { /** * Gets the value of the cofactor property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the cofactor property. + * This is why there is not a set method for the cofactor property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getCofactor().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link CofactorType } * @@ -462,20 +462,20 @@ public class CommentType { /** * Gets the value of the subcellularLocation property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the subcellularLocation property. + * This is why there is not a set method for the subcellularLocation property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getSubcellularLocation().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link SubcellularLocationType } * @@ -515,20 +515,20 @@ public class CommentType { /** * Gets the value of the link property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the link property. + * This is why there is not a set method for the link property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getLink().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link CommentType.Link } * @@ -544,20 +544,20 @@ public class CommentType { /** * Gets the value of the event property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the event property. + * This is why there is not a set method for the event property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getEvent().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EventType } * @@ -573,20 +573,20 @@ public class CommentType { /** * Gets the value of the isoform property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the isoform property. + * This is why there is not a set method for the isoform property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getIsoform().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link IsoformType } * @@ -602,20 +602,20 @@ public class CommentType { /** * Gets the value of the interactant property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the interactant property. + * This is why there is not a set method for the interactant property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getInteractant().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link InteractantType } * @@ -703,20 +703,20 @@ public class CommentType { /** * Gets the value of the location property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the location property. + * This is why there is not a set method for the location property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getLocation().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link LocationType } * @@ -732,20 +732,20 @@ public class CommentType { /** * Gets the value of the text property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the text property. + * This is why there is not a set method for the text property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getText().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -905,20 +905,20 @@ public class CommentType { /** * Gets the value of the evidence property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the evidence property. + * This is why there is not a set method for the evidence property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

      *    getEvidence().add(newItem);
-     * </pre>
+     * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link Integer } * @@ -933,22 +933,22 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="max" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/&gt; - * &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;/sequence&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="max" type="{http://uniprot.org/uniprot}evidencedStringType" minOccurs="0"/>
+     *         <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *       </sequence>
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -989,20 +989,20 @@ public class CommentType { /** * Gets the value of the text property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the text property. + * This is why there is not a set method for the text property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getText().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1019,51 +1019,51 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. - * - * <p>The following schema fragment specifies the expected content contained within this class. - * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="sequence" minOccurs="0"&gt; - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;attribute name="resource" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="EMBL-CDS"/&gt; - * &lt;enumeration value="EMBL"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * &lt;/element&gt; - * &lt;/sequence&gt; - * &lt;attribute name="type" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="frameshift"/&gt; - * &lt;enumeration value="erroneous initiation"/&gt; - * &lt;enumeration value="erroneous termination"/&gt; - * &lt;enumeration value="erroneous gene model prediction"/&gt; - * &lt;enumeration value="erroneous translation"/&gt; - * &lt;enumeration value="miscellaneous discrepancy"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

Java class for anonymous complex type. + * + *

The following schema fragment specifies the expected content contained within this class. + * + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="sequence" minOccurs="0">
+     *           <complexType>
+     *             <complexContent>
+     *               <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *                 <attribute name="resource" use="required">
+     *                   <simpleType>
+     *                     <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+     *                       <enumeration value="EMBL-CDS"/>
+     *                       <enumeration value="EMBL"/>
+     *                     </restriction>
+     *                   </simpleType>
+     *                 </attribute>
+     *                 <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
+     *                 <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" />
+     *               </restriction>
+     *             </complexContent>
+     *           </complexType>
+     *         </element>
+     *       </sequence>
+     *       <attribute name="type" use="required">
+     *         <simpleType>
+     *           <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+     *             <enumeration value="frameshift"/>
+     *             <enumeration value="erroneous initiation"/>
+     *             <enumeration value="erroneous termination"/>
+     *             <enumeration value="erroneous gene model prediction"/>
+     *             <enumeration value="erroneous translation"/>
+     *             <enumeration value="miscellaneous discrepancy"/>
+     *           </restriction>
+     *         </simpleType>
+     *       </attribute>
+     *       <attribute name="ref" type="{http://www.w3.org/2001/XMLSchema}string" />
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1153,28 +1153,28 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. - * - * <p>The following schema fragment specifies the expected content contained within this class. - * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;attribute name="resource" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="EMBL-CDS"/&gt; - * &lt;enumeration value="EMBL"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

Java class for anonymous complex type. + * + *

The following schema fragment specifies the expected content contained within this class. + * + *

+         * <complexType>
+         *   <complexContent>
+         *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+         *       <attribute name="resource" use="required">
+         *         <simpleType>
+         *           <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+         *             <enumeration value="EMBL-CDS"/>
+         *             <enumeration value="EMBL"/>
+         *           </restriction>
+         *         </simpleType>
+         *       </attribute>
+         *       <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
+         *       <attribute name="version" type="{http://www.w3.org/2001/XMLSchema}int" />
+         *     </restriction>
+         *   </complexContent>
+         * </complexType>
+         * 
* * */ @@ -1267,25 +1267,25 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. - * - * <p>The following schema fragment specifies the expected content contained within this class. - * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/&gt; - * &lt;element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/&gt; - * &lt;element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/&gt; - * &lt;element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/&gt; - * &lt;/sequence&gt; - * &lt;attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

Java class for anonymous complex type. + * + *

The following schema fragment specifies the expected content contained within this class. + * + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="name" type="{http://www.w3.org/2001/XMLSchema}string"/>
+     *         <element name="acronym" type="{http://www.w3.org/2001/XMLSchema}string"/>
+     *         <element name="description" type="{http://www.w3.org/2001/XMLSchema}string"/>
+     *         <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType"/>
+     *       </sequence>
+     *       <attribute name="id" use="required" type="{http://www.w3.org/2001/XMLSchema}string" />
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1433,23 +1433,23 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="KM" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="Vmax" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;/sequence&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="KM" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *         <element name="Vmax" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *         <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded" minOccurs="0"/>
+     *       </sequence>
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1470,20 +1470,20 @@ public class CommentType { /** * Gets the value of the km property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the km property. + * This is why there is not a set method for the km property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getKM().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1499,20 +1499,20 @@ public class CommentType { /** * Gets the value of the vmax property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the vmax property. + * This is why there is not a set method for the vmax property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getVmax().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1528,20 +1528,20 @@ public class CommentType { /** * Gets the value of the text property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the text property. + * This is why there is not a set method for the text property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getText().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1558,19 +1558,19 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <attribute name="uri" use="required" type="{http://www.w3.org/2001/XMLSchema}anyURI" />
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1610,21 +1610,21 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/&gt; - * &lt;/sequence&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/>
+     *       </sequence>
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1640,20 +1640,20 @@ public class CommentType { /** * Gets the value of the text property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the text property. + * This is why there is not a set method for the text property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getText().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1670,21 +1670,21 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/&gt; - * &lt;/sequence&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/>
+     *       </sequence>
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1700,20 +1700,20 @@ public class CommentType { /** * Gets the value of the text property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the text property. + * This is why there is not a set method for the text property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getText().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } * @@ -1730,21 +1730,21 @@ public class CommentType { /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/&gt; - * &lt;/sequence&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + *

+     * <complexType>
+     *   <complexContent>
+     *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+     *       <sequence>
+     *         <element name="text" type="{http://uniprot.org/uniprot}evidencedStringType" maxOccurs="unbounded"/>
+     *       </sequence>
+     *     </restriction>
+     *   </complexContent>
+     * </complexType>
+     * 
* * */ @@ -1760,20 +1760,20 @@ public class CommentType { /** * Gets the value of the text property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the text property. + * This is why there is not a set method for the text property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + *

          *    getText().add(newItem);
-         * </pre>
+         * 
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidencedStringType } *