X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FEntry.java;h=7c485d5d8d3c475a949570d5a3c29ca9e2ee59c7;hb=ee19482a42988b76fdca9d46065ce2ca14ea73c5;hp=34a12989d1de4d224d44ed1506768076371772cb;hpb=7b32d373b60d0af55481cfd6d377b2cc1ec035c0;p=jalview.git diff --git a/src/jalview/xml/binding/uniprot/Entry.java b/src/jalview/xml/binding/uniprot/Entry.java index 34a1298..7c485d5 100644 --- a/src/jalview/xml/binding/uniprot/Entry.java +++ b/src/jalview/xml/binding/uniprot/Entry.java @@ -1,8 +1,8 @@ // -// This file was generated by the Eclipse Implementation of JAXB, v2.3.3 -// See https://eclipse-ee4j.github.io/jaxb-ri +// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 +// See http://java.sun.com/xml/jaxb // Any modifications to this file will be lost upon recompilation of the source schema. -// Generated on: 2022.02.07 at 04:44:21 PM GMT +// Generated on: 2023.02.22 at 10:08:58 PM GMT // @@ -21,46 +21,46 @@ import javax.xml.datatype.XMLGregorianCalendar; /** - * <p>Java class for anonymous complex type. + *

Java class for anonymous complex type. * - * <p>The following schema fragment specifies the expected content contained within this class. + *

The following schema fragment specifies the expected content contained within this class. * - * <pre> - * &lt;complexType&gt; - * &lt;complexContent&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}anyType"&gt; - * &lt;sequence&gt; - * &lt;element name="accession" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/&gt; - * &lt;element name="name" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/&gt; - * &lt;element name="protein" type="{http://uniprot.org/uniprot}proteinType"/&gt; - * &lt;element name="gene" type="{http://uniprot.org/uniprot}geneType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="organism" type="{http://uniprot.org/uniprot}organismType"/&gt; - * &lt;element name="organismHost" type="{http://uniprot.org/uniprot}organismType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="geneLocation" type="{http://uniprot.org/uniprot}geneLocationType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="reference" type="{http://uniprot.org/uniprot}referenceType" maxOccurs="unbounded"/&gt; - * &lt;element name="comment" type="{http://uniprot.org/uniprot}commentType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="proteinExistence" type="{http://uniprot.org/uniprot}proteinExistenceType"/&gt; - * &lt;element name="keyword" type="{http://uniprot.org/uniprot}keywordType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="feature" type="{http://uniprot.org/uniprot}featureType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="evidence" type="{http://uniprot.org/uniprot}evidenceType" maxOccurs="unbounded" minOccurs="0"/&gt; - * &lt;element name="sequence" type="{http://uniprot.org/uniprot}sequenceType"/&gt; - * &lt;/sequence&gt; - * &lt;attribute name="dataset" use="required"&gt; - * &lt;simpleType&gt; - * &lt;restriction base="{http://www.w3.org/2001/XMLSchema}string"&gt; - * &lt;enumeration value="Swiss-Prot"/&gt; - * &lt;enumeration value="TrEMBL"/&gt; - * &lt;/restriction&gt; - * &lt;/simpleType&gt; - * &lt;/attribute&gt; - * &lt;attribute name="created" use="required" type="{http://www.w3.org/2001/XMLSchema}date" /&gt; - * &lt;attribute name="modified" use="required" type="{http://www.w3.org/2001/XMLSchema}date" /&gt; - * &lt;attribute name="version" use="required" type="{http://www.w3.org/2001/XMLSchema}int" /&gt; - * &lt;/restriction&gt; - * &lt;/complexContent&gt; - * &lt;/complexType&gt; - * </pre> + * 

+ * <complexType>
+ *   <complexContent>
+ *     <restriction base="{http://www.w3.org/2001/XMLSchema}anyType">
+ *       <sequence>
+ *         <element name="accession" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/>
+ *         <element name="name" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/>
+ *         <element name="protein" type="{http://uniprot.org/uniprot}proteinType"/>
+ *         <element name="gene" type="{http://uniprot.org/uniprot}geneType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="organism" type="{http://uniprot.org/uniprot}organismType"/>
+ *         <element name="organismHost" type="{http://uniprot.org/uniprot}organismType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="geneLocation" type="{http://uniprot.org/uniprot}geneLocationType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="reference" type="{http://uniprot.org/uniprot}referenceType" maxOccurs="unbounded"/>
+ *         <element name="comment" type="{http://uniprot.org/uniprot}commentType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="dbReference" type="{http://uniprot.org/uniprot}dbReferenceType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="proteinExistence" type="{http://uniprot.org/uniprot}proteinExistenceType"/>
+ *         <element name="keyword" type="{http://uniprot.org/uniprot}keywordType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="feature" type="{http://uniprot.org/uniprot}featureType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="evidence" type="{http://uniprot.org/uniprot}evidenceType" maxOccurs="unbounded" minOccurs="0"/>
+ *         <element name="sequence" type="{http://uniprot.org/uniprot}sequenceType"/>
+ *       </sequence>
+ *       <attribute name="dataset" use="required">
+ *         <simpleType>
+ *           <restriction base="{http://www.w3.org/2001/XMLSchema}string">
+ *             <enumeration value="Swiss-Prot"/>
+ *             <enumeration value="TrEMBL"/>
+ *           </restriction>
+ *         </simpleType>
+ *       </attribute>
+ *       <attribute name="created" use="required" type="{http://www.w3.org/2001/XMLSchema}date" />
+ *       <attribute name="modified" use="required" type="{http://www.w3.org/2001/XMLSchema}date" />
+ *       <attribute name="version" use="required" type="{http://www.w3.org/2001/XMLSchema}int" />
+ *     </restriction>
+ *   </complexContent>
+ * </complexType>
+ *
* * */ @@ -122,20 +122,20 @@ public class Entry { /** * Gets the value of the accession property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the accession property. + * This is why there is not a set method for the accession property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getAccession().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link String } * @@ -151,20 +151,20 @@ public class Entry { /** * Gets the value of the name property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the name property. + * This is why there is not a set method for the name property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getName().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link String } * @@ -204,20 +204,20 @@ public class Entry { /** * Gets the value of the gene property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the gene property. + * This is why there is not a set method for the gene property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getGene().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link GeneType } * @@ -257,20 +257,20 @@ public class Entry { /** * Gets the value of the organismHost property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the organismHost property. + * This is why there is not a set method for the organismHost property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getOrganismHost().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link OrganismType } * @@ -286,20 +286,20 @@ public class Entry { /** * Gets the value of the geneLocation property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the geneLocation property. + * This is why there is not a set method for the geneLocation property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getGeneLocation().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link GeneLocationType } * @@ -315,20 +315,20 @@ public class Entry { /** * Gets the value of the reference property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the reference property. + * This is why there is not a set method for the reference property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getReference().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link ReferenceType } * @@ -344,20 +344,20 @@ public class Entry { /** * Gets the value of the comment property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the comment property. + * This is why there is not a set method for the comment property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getComment().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link CommentType } * @@ -373,20 +373,20 @@ public class Entry { /** * Gets the value of the dbReference property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the dbReference property. + * This is why there is not a set method for the dbReference property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getDbReference().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link DbReferenceType } * @@ -426,20 +426,20 @@ public class Entry { /** * Gets the value of the keyword property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the keyword property. + * This is why there is not a set method for the keyword property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getKeyword().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link KeywordType } * @@ -455,20 +455,20 @@ public class Entry { /** * Gets the value of the feature property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the feature property. + * This is why there is not a set method for the feature property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getFeature().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link FeatureType } * @@ -484,20 +484,20 @@ public class Entry { /** * Gets the value of the evidence property. * - * <p> + *

* This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. - * This is why there is not a <CODE>set</CODE> method for the evidence property. + * This is why there is not a set method for the evidence property. * - * <p> + *

* For example, to add a new item, do as follows: - * <pre> + * 

      *    getEvidence().add(newItem);
-     * </pre>
+     *
* * - * <p> + *

* Objects of the following type(s) are allowed in the list * {@link EvidenceType } *