X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FOrganismType.java;h=55774e3f54ea343bf62670c8f2f181deb927dc80;hb=427c5af6eb8378c4a9d5bf6a967f55ab8fd253a5;hp=e53de4ca961af734764e632bfc11808b48aee68f;hpb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;p=jalview.git diff --git a/src/jalview/xml/binding/uniprot/OrganismType.java b/src/jalview/xml/binding/uniprot/OrganismType.java index e53de4c..55774e3 100644 --- a/src/jalview/xml/binding/uniprot/OrganismType.java +++ b/src/jalview/xml/binding/uniprot/OrganismType.java @@ -2,9 +2,10 @@ // This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802 // See http://java.sun.com/xml/jaxb // Any modifications to this file will be lost upon recompilation of the source schema. -// Generated on: 2019.04.05 at 08:01:44 AM BST +// Generated on: 2023.02.22 at 10:08:58 PM GMT // + package jalview.xml.binding.uniprot; import java.util.ArrayList; @@ -15,15 +16,13 @@ import javax.xml.bind.annotation.XmlAttribute; import javax.xml.bind.annotation.XmlElement; import javax.xml.bind.annotation.XmlType; + /** * Describes the source organism. * - *
- * Java class for organismType complex type. + *
Java class for organismType complex type. * - *
- * The following schema fragment specifies the expected content contained within - * this class. + *
The following schema fragment specifies the expected content contained within this class. * *
* <complexType name="organismType"> @@ -53,203 +52,190 @@ import javax.xml.bind.annotation.XmlType; * */ @XmlAccessorType(XmlAccessType.FIELD) -@XmlType( - name = "organismType", - propOrder = - { "name", "dbReference", "lineage" }) -public class OrganismType -{ - - @XmlElement(required = true) - protected Listname; - - @XmlElement(required = true) - protected List dbReference; - - protected OrganismType.Lineage lineage; - - @XmlAttribute(name = "evidence") - protected List evidence; - - /** - * Gets the value of the name property. - * - * - * This accessor method returns a reference to the live list, not a snapshot. - * Therefore any modification you make to the returned list will be present - * inside the JAXB object. This is why there is not a
set
method - * for the name property. - * - *- * For example, to add a new item, do as follows: - * - *
- * getName().add(newItem); - *- * - * - *- * Objects of the following type(s) are allowed in the list - * {@link OrganismNameType } - * - * - */ - public List
getName() - { - if (name == null) - { - name = new ArrayList (); +@XmlType(name = "organismType", propOrder = { + "name", + "dbReference", + "lineage" +}) +public class OrganismType { + + @XmlElement(required = true) + protected List name; + @XmlElement(required = true) + protected List dbReference; + protected OrganismType.Lineage lineage; + @XmlAttribute(name = "evidence") + protected List evidence; + + /** + * Gets the value of the name property. + * + * + * This accessor method returns a reference to the live list, + * not a snapshot. Therefore any modification you make to the + * returned list will be present inside the JAXB object. + * This is why there is not a
set
method for the name property. + * + *+ * For example, to add a new item, do as follows: + *
+ * getName().add(newItem); + *+ * + * + *+ * Objects of the following type(s) are allowed in the list + * {@link OrganismNameType } + * + * + */ + public List
getName() { + if (name == null) { + name = new ArrayList (); + } + return this.name; } - return this.name; - } - - /** - * Gets the value of the dbReference property. - * - * - * This accessor method returns a reference to the live list, not a snapshot. - * Therefore any modification you make to the returned list will be present - * inside the JAXB object. This is why there is not a
set
method - * for the dbReference property. - * - *- * For example, to add a new item, do as follows: - * - *
- * getDbReference().add(newItem); - *- * - * - *- * Objects of the following type(s) are allowed in the list - * {@link DbReferenceType } - * - * - */ - public List
getDbReference() - { - if (dbReference == null) - { - dbReference = new ArrayList (); + + /** + * Gets the value of the dbReference property. + * + * + * This accessor method returns a reference to the live list, + * not a snapshot. Therefore any modification you make to the + * returned list will be present inside the JAXB object. + * This is why there is not a
set
method for the dbReference property. + * + *+ * For example, to add a new item, do as follows: + *
+ * getDbReference().add(newItem); + *+ * + * + *+ * Objects of the following type(s) are allowed in the list + * {@link DbReferenceType } + * + * + */ + public List
getDbReference() { + if (dbReference == null) { + dbReference = new ArrayList (); + } + return this.dbReference; } - return this.dbReference; - } - - /** - * Gets the value of the lineage property. - * - * @return possible object is {@link OrganismType.Lineage } - * - */ - public OrganismType.Lineage getLineage() - { - return lineage; - } - - /** - * Sets the value of the lineage property. - * - * @param value - * allowed object is {@link OrganismType.Lineage } - * - */ - public void setLineage(OrganismType.Lineage value) - { - this.lineage = value; - } - - /** - * Gets the value of the evidence property. - * - * - * This accessor method returns a reference to the live list, not a snapshot. - * Therefore any modification you make to the returned list will be present - * inside the JAXB object. This is why there is not a
set
method - * for the evidence property. - * - *- * For example, to add a new item, do as follows: - * - *
- * getEvidence().add(newItem); - *- * - * - *- * Objects of the following type(s) are allowed in the list {@link Integer } - * - * - */ - public List
getEvidence() - { - if (evidence == null) - { - evidence = new ArrayList (); + + /** + * Gets the value of the lineage property. + * + * @return + * possible object is + * {@link OrganismType.Lineage } + * + */ + public OrganismType.Lineage getLineage() { + return lineage; } - return this.evidence; - } - - /** - * - * Java class for anonymous complex type. - * - *
- * The following schema fragment specifies the expected content contained - * within this class. - * - *
- * <complexType> - * <complexContent> - * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> - * <sequence> - * <element name="taxon" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/> - * </sequence> - * </restriction> - * </complexContent> - * </complexType> - *- * - * - */ - @XmlAccessorType(XmlAccessType.FIELD) - @XmlType(name = "", propOrder = { "taxon" }) - public static class Lineage - { - @XmlElement(required = true) - protected Listtaxon; + /** + * Sets the value of the lineage property. + * + * @param value + * allowed object is + * {@link OrganismType.Lineage } + * + */ + public void setLineage(OrganismType.Lineage value) { + this.lineage = value; + } /** - * Gets the value of the taxon property. + * Gets the value of the evidence property. * * - * This accessor method returns a reference to the live list, not a - * snapshot. Therefore any modification you make to the returned list will - * be present inside the JAXB object. This is why there is not a - *
set
method for the taxon property. + * This accessor method returns a reference to the live list, + * not a snapshot. Therefore any modification you make to the + * returned list will be present inside the JAXB object. + * This is why there is not aset
method for the evidence property. * ** For example, to add a new item, do as follows: - * *
- * getTaxon().add(newItem); + * getEvidence().add(newItem); ** * *- * Objects of the following type(s) are allowed in the list {@link String } + * Objects of the following type(s) are allowed in the list + * {@link Integer } * * */ - public List
getTaxon() - { - if (taxon == null) - { - taxon = new ArrayList (); - } - return this.taxon; + public List getEvidence() { + if (evidence == null) { + evidence = new ArrayList (); + } + return this.evidence; } - } + + /** + * Java class for anonymous complex type. + * + *
The following schema fragment specifies the expected content contained within this class. + * + *
+ * <complexType> + * <complexContent> + * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> + * <sequence> + * <element name="taxon" type="{http://www.w3.org/2001/XMLSchema}string" maxOccurs="unbounded"/> + * </sequence> + * </restriction> + * </complexContent> + * </complexType> + *+ * + * + */ + @XmlAccessorType(XmlAccessType.FIELD) + @XmlType(name = "", propOrder = { + "taxon" + }) + public static class Lineage { + + @XmlElement(required = true) + protected Listtaxon; + + /** + * Gets the value of the taxon property. + * + * + * This accessor method returns a reference to the live list, + * not a snapshot. Therefore any modification you make to the + * returned list will be present inside the JAXB object. + * This is why there is not a
set
method for the taxon property. + * + *+ * For example, to add a new item, do as follows: + *
+ * getTaxon().add(newItem); + *+ * + * + *+ * Objects of the following type(s) are allowed in the list + * {@link String } + * + * + */ + public List
getTaxon() { + if (taxon == null) { + taxon = new ArrayList (); + } + return this.taxon; + } + + } }