X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fxml%2Fbinding%2Funiprot%2FSourceDataType.java;h=959897653a11616feba6101559c2e33e71210fec;hb=ae447a3691fb85aaf4e27cd6af8a6e0eb3d50530;hp=3b71bae25b8908b01a6306aa9e89b9f31f1c6cda;hpb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;p=jalview.git
diff --git a/src/jalview/xml/binding/uniprot/SourceDataType.java b/src/jalview/xml/binding/uniprot/SourceDataType.java
index 3b71bae..9598976 100644
--- a/src/jalview/xml/binding/uniprot/SourceDataType.java
+++ b/src/jalview/xml/binding/uniprot/SourceDataType.java
@@ -2,9 +2,10 @@
// This file was generated by the JavaTM Architecture for XML Binding(JAXB) Reference Implementation, v2.2.8-b130911.1802
// See http://java.sun.com/xml/jaxb
// Any modifications to this file will be lost upon recompilation of the source schema.
-// Generated on: 2019.04.05 at 08:01:44 AM BST
+// Generated on: 2023.02.22 at 10:08:58 PM GMT
//
+
package jalview.xml.binding.uniprot;
import java.util.ArrayList;
@@ -17,16 +18,14 @@ import javax.xml.bind.annotation.XmlElements;
import javax.xml.bind.annotation.XmlType;
import javax.xml.bind.annotation.XmlValue;
+
/**
- * Describes the source of the sequence according to the citation. Equivalent to
- * the flat file RC-line.
+ * Describes the source of the sequence according to the citation.
+ * Equivalent to the flat file RC-line.
*
- *
- * Java class for sourceDataType complex type.
+ *
Java class for sourceDataType complex type.
*
- *
- * The following schema fragment specifies the expected content contained within
- * this class.
+ *
The following schema fragment specifies the expected content contained within this class.
*
*
* <complexType name="sourceDataType">
@@ -78,401 +77,385 @@ import javax.xml.bind.annotation.XmlValue;
*
*/
@XmlAccessorType(XmlAccessType.FIELD)
-@XmlType(
- name = "sourceDataType",
- propOrder =
- { "strainOrPlasmidOrTransposon" })
-public class SourceDataType
-{
-
- @XmlElements({
- @XmlElement(name = "strain", type = SourceDataType.Strain.class),
- @XmlElement(name = "plasmid", type = SourceDataType.Plasmid.class),
- @XmlElement(
- name = "transposon",
- type = SourceDataType.Transposon.class),
- @XmlElement(name = "tissue", type = SourceDataType.Tissue.class) })
- protected List strainOrPlasmidOrTransposon;
-
- /**
- * Gets the value of the strainOrPlasmidOrTransposon property.
- *
- *
- * This accessor method returns a reference to the live list, not a snapshot.
- * Therefore any modification you make to the returned list will be present
- * inside the JAXB object. This is why there is not a set method
- * for the strainOrPlasmidOrTransposon property.
- *
- *
- * For example, to add a new item, do as follows:
- *
- *
- * getStrainOrPlasmidOrTransposon().add(newItem);
- *
- *
- *
- *
- * Objects of the following type(s) are allowed in the list
- * {@link SourceDataType.Strain } {@link SourceDataType.Plasmid }
- * {@link SourceDataType.Transposon } {@link SourceDataType.Tissue }
- *
- *
- */
- public List getStrainOrPlasmidOrTransposon()
- {
- if (strainOrPlasmidOrTransposon == null)
- {
- strainOrPlasmidOrTransposon = new ArrayList();
- }
- return this.strainOrPlasmidOrTransposon;
- }
-
- /**
- *
- * Java class for anonymous complex type.
- *
- *
- * The following schema fragment specifies the expected content contained
- * within this class.
- *
- *
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
- *
- *
- *
- */
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = { "value" })
- public static class Plasmid
- {
-
- @XmlValue
- protected String value;
-
- @XmlAttribute(name = "evidence")
- protected List evidence;
-
- /**
- * Gets the value of the value property.
- *
- * @return possible object is {@link String }
- *
- */
- public String getValue()
- {
- return value;
- }
+@XmlType(name = "sourceDataType", propOrder = {
+ "strainOrPlasmidOrTransposon"
+})
+public class SourceDataType {
+
+ @XmlElements({
+ @XmlElement(name = "strain", type = SourceDataType.Strain.class),
+ @XmlElement(name = "plasmid", type = SourceDataType.Plasmid.class),
+ @XmlElement(name = "transposon", type = SourceDataType.Transposon.class),
+ @XmlElement(name = "tissue", type = SourceDataType.Tissue.class)
+ })
+ protected List strainOrPlasmidOrTransposon;
/**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is {@link String }
- *
- */
- public void setValue(String value)
- {
- this.value = value;
- }
-
- /**
- * Gets the value of the evidence property.
+ * Gets the value of the strainOrPlasmidOrTransposon property.
*
*
- * This accessor method returns a reference to the live list, not a
- * snapshot. Therefore any modification you make to the returned list will
- * be present inside the JAXB object. This is why there is not a
- * set method for the evidence property.
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a set method for the strainOrPlasmidOrTransposon property.
*
*
* For example, to add a new item, do as follows:
- *
*
- * getEvidence().add(newItem);
+ * getStrainOrPlasmidOrTransposon().add(newItem);
*
*
*
*
- * Objects of the following type(s) are allowed in the list {@link Integer }
+ * Objects of the following type(s) are allowed in the list
+ * {@link SourceDataType.Strain }
+ * {@link SourceDataType.Plasmid }
+ * {@link SourceDataType.Transposon }
+ * {@link SourceDataType.Tissue }
*
*
*/
- public List getEvidence()
- {
- if (evidence == null)
- {
- evidence = new ArrayList();
- }
- return this.evidence;
+ public List getStrainOrPlasmidOrTransposon() {
+ if (strainOrPlasmidOrTransposon == null) {
+ strainOrPlasmidOrTransposon = new ArrayList();
+ }
+ return this.strainOrPlasmidOrTransposon;
}
- }
-
- /**
- *
- * Java class for anonymous complex type.
- *
- *
- * The following schema fragment specifies the expected content contained
- * within this class.
- *
- *
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
- *
- *
- *
- */
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = { "value" })
- public static class Strain
- {
-
- @XmlValue
- protected String value;
-
- @XmlAttribute(name = "evidence")
- protected List evidence;
/**
- * Gets the value of the value property.
+ * Java class for anonymous complex type.
*
- * @return possible object is {@link String }
+ *
The following schema fragment specifies the expected content contained within this class.
*
- */
- public String getValue()
- {
- return value;
- }
-
- /**
- * Sets the value of the value property.
+ *
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
+ *
*
- * @param value
- * allowed object is {@link String }
*
*/
- public void setValue(String value)
- {
- this.value = value;
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = {
+ "value"
+ })
+ public static class Plasmid {
+
+ @XmlValue
+ protected String value;
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+
+ /**
+ * Gets the value of the value property.
+ *
+ * @return
+ * possible object is
+ * {@link String }
+ *
+ */
+ public String getValue() {
+ return value;
+ }
+
+ /**
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is
+ * {@link String }
+ *
+ */
+ public void setValue(String value) {
+ this.value = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ *
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
+ *
+ * getEvidence().add(newItem);
+ *
+ *
+ *
+ *
+ * Objects of the following type(s) are allowed in the list
+ * {@link Integer }
+ *
+ *
+ */
+ public List getEvidence() {
+ if (evidence == null) {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
+ }
+
}
+
/**
- * Gets the value of the evidence property.
+ * Java class for anonymous complex type.
*
- *
- * This accessor method returns a reference to the live list, not a
- * snapshot. Therefore any modification you make to the returned list will
- * be present inside the JAXB object. This is why there is not a
- * set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
+ *
The following schema fragment specifies the expected content contained within this class.
*
*
- * getEvidence().add(newItem);
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
*
*
*
- *
- * Objects of the following type(s) are allowed in the list {@link Integer }
- *
- *
*/
- public List getEvidence()
- {
- if (evidence == null)
- {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
-
- }
-
- /**
- *
- * Java class for anonymous complex type.
- *
- *
- * The following schema fragment specifies the expected content contained
- * within this class.
- *
- *
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
- *
- *
- *
- */
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = { "value" })
- public static class Tissue
- {
-
- @XmlValue
- protected String value;
-
- @XmlAttribute(name = "evidence")
- protected List evidence;
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = {
+ "value"
+ })
+ public static class Strain {
+
+ @XmlValue
+ protected String value;
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+
+ /**
+ * Gets the value of the value property.
+ *
+ * @return
+ * possible object is
+ * {@link String }
+ *
+ */
+ public String getValue() {
+ return value;
+ }
+
+ /**
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is
+ * {@link String }
+ *
+ */
+ public void setValue(String value) {
+ this.value = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ *
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
+ *
+ * getEvidence().add(newItem);
+ *
+ *
+ *
+ *
+ * Objects of the following type(s) are allowed in the list
+ * {@link Integer }
+ *
+ *
+ */
+ public List getEvidence() {
+ if (evidence == null) {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
+ }
- /**
- * Gets the value of the value property.
- *
- * @return possible object is {@link String }
- *
- */
- public String getValue()
- {
- return value;
}
- /**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is {@link String }
- *
- */
- public void setValue(String value)
- {
- this.value = value;
- }
/**
- * Gets the value of the evidence property.
+ * Java class for anonymous complex type.
*
- *
- * This accessor method returns a reference to the live list, not a
- * snapshot. Therefore any modification you make to the returned list will
- * be present inside the JAXB object. This is why there is not a
- * set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
+ *
The following schema fragment specifies the expected content contained within this class.
*
*
- * getEvidence().add(newItem);
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
*
*
*
- *
- * Objects of the following type(s) are allowed in the list {@link Integer }
- *
- *
*/
- public List getEvidence()
- {
- if (evidence == null)
- {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = {
+ "value"
+ })
+ public static class Tissue {
+
+ @XmlValue
+ protected String value;
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+
+ /**
+ * Gets the value of the value property.
+ *
+ * @return
+ * possible object is
+ * {@link String }
+ *
+ */
+ public String getValue() {
+ return value;
+ }
+
+ /**
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is
+ * {@link String }
+ *
+ */
+ public void setValue(String value) {
+ this.value = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ *
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
+ *
+ * getEvidence().add(newItem);
+ *
+ *
+ *
+ *
+ * Objects of the following type(s) are allowed in the list
+ * {@link Integer }
+ *
+ *
+ */
+ public List getEvidence() {
+ if (evidence == null) {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
+ }
- }
-
- /**
- *
- * Java class for anonymous complex type.
- *
- *
- * The following schema fragment specifies the expected content contained
- * within this class.
- *
- *
- * <complexType>
- * <simpleContent>
- * <extension base="<http://www.w3.org/2001/XMLSchema>string">
- * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
- * </extension>
- * </simpleContent>
- * </complexType>
- *
- *
- *
- */
- @XmlAccessorType(XmlAccessType.FIELD)
- @XmlType(name = "", propOrder = { "value" })
- public static class Transposon
- {
-
- @XmlValue
- protected String value;
-
- @XmlAttribute(name = "evidence")
- protected List evidence;
-
- /**
- * Gets the value of the value property.
- *
- * @return possible object is {@link String }
- *
- */
- public String getValue()
- {
- return value;
}
- /**
- * Sets the value of the value property.
- *
- * @param value
- * allowed object is {@link String }
- *
- */
- public void setValue(String value)
- {
- this.value = value;
- }
/**
- * Gets the value of the evidence property.
+ * Java class for anonymous complex type.
*
- *
- * This accessor method returns a reference to the live list, not a
- * snapshot. Therefore any modification you make to the returned list will
- * be present inside the JAXB object. This is why there is not a
- * set method for the evidence property.
- *
- *
- * For example, to add a new item, do as follows:
+ *
The following schema fragment specifies the expected content contained within this class.
*
*
- * getEvidence().add(newItem);
+ * <complexType>
+ * <simpleContent>
+ * <extension base="<http://www.w3.org/2001/XMLSchema>string">
+ * <attribute name="evidence" type="{http://uniprot.org/uniprot}intListType" />
+ * </extension>
+ * </simpleContent>
+ * </complexType>
*
*
*
- *
- * Objects of the following type(s) are allowed in the list {@link Integer }
- *
- *
*/
- public List getEvidence()
- {
- if (evidence == null)
- {
- evidence = new ArrayList();
- }
- return this.evidence;
- }
+ @XmlAccessorType(XmlAccessType.FIELD)
+ @XmlType(name = "", propOrder = {
+ "value"
+ })
+ public static class Transposon {
+
+ @XmlValue
+ protected String value;
+ @XmlAttribute(name = "evidence")
+ protected List evidence;
+
+ /**
+ * Gets the value of the value property.
+ *
+ * @return
+ * possible object is
+ * {@link String }
+ *
+ */
+ public String getValue() {
+ return value;
+ }
+
+ /**
+ * Sets the value of the value property.
+ *
+ * @param value
+ * allowed object is
+ * {@link String }
+ *
+ */
+ public void setValue(String value) {
+ this.value = value;
+ }
+
+ /**
+ * Gets the value of the evidence property.
+ *
+ *
+ * This accessor method returns a reference to the live list,
+ * not a snapshot. Therefore any modification you make to the
+ * returned list will be present inside the JAXB object.
+ * This is why there is not a set method for the evidence property.
+ *
+ *
+ * For example, to add a new item, do as follows:
+ *
+ * getEvidence().add(newItem);
+ *
+ *
+ *
+ *
+ * Objects of the following type(s) are allowed in the list
+ * {@link Integer }
+ *
+ *
+ */
+ public List getEvidence() {
+ if (evidence == null) {
+ evidence = new ArrayList();
+ }
+ return this.evidence;
+ }
- }
+ }
}