X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Forg%2Fbiojava%2Fdasobert%2Ffeature%2FFeatureMapComparator.java;fp=src%2Forg%2Fbiojava%2Fdasobert%2Ffeature%2FFeatureMapComparator.java;h=0000000000000000000000000000000000000000;hb=c1aff0bc80c5a64ec93acd8b6c5844da2d6da509;hp=aa38981ab7f43aad0f6bdf03149042639ea97cc5;hpb=ec4ef38882bce0469ce7c65cd70ceb85421cfbd2;p=jalview.git

diff --git a/src/org/biojava/dasobert/feature/FeatureMapComparator.java b/src/org/biojava/dasobert/feature/FeatureMapComparator.java
deleted file mode 100644
index aa38981..0000000
--- a/src/org/biojava/dasobert/feature/FeatureMapComparator.java
+++ /dev/null
@@ -1,68 +0,0 @@
-/*
- *                    BioJava development code
- *
- * This code may be freely distributed and modified under the
- * terms of the GNU Lesser General Public Licence.  This should
- * be distributed with the code.  If you do not have a copy,
- * see:
- *
- *      http://www.gnu.org/copyleft/lesser.html
- *
- * Copyright for this code is held jointly by the individual
- * authors.  These should be listed in @author doc comments.
- *
- * For more information on the BioJava project and its aims,
- * or to join the biojava-l mailing list, visit the home page
- * at:
- *
- *      http://www.biojava.org/
- *
- * Created on 23.09.2004
- * @author Andreas Prlic
- *
- */
-
-package org.biojava.dasobert.feature;
-
-import java.util.Comparator;
-import java.util.Map;
-
-/**
- * a comparator to sort Features if they are still in a Map ( sorts by type )
- * 
- * @author Andreas Prlic
- */
-
-public class FeatureMapComparator implements Comparator
-{
-
-  public FeatureMapComparator()
-  {
-  }
-
-  public int compare(Object a, Object b)
-  {
-    Map x = (Map) a;
-    Map y = (Map) b;
-
-    String typea = (String) x.get("TYPE");
-    String typeb = (String) y.get("TYPE");
-
-    if (isSecstruc(typea) && isSecstruc(typeb))
-    {
-      return 0;
-    }
-    return typea.compareTo(typeb);
-  }
-
-  public boolean isSecstruc(String type)
-  {
-    if (type.equals("HELIX") || type.equals("STRAND")
-            || type.equals("TURN"))
-    {
-      return true;
-    }
-    return false;
-  }
-
-}