X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Forg%2Fbiojava%2Fdasobert%2Ffeature%2FFeatureTrackImpl.java;h=a13fbb3a99117ba6aad5fc71bca40c384f6031ae;hb=bedaaf827545d4e425c98ada89a9dfbff6fc055b;hp=8eaf6f842ac0914d8bf3564f19dace534910db88;hpb=54e003f9b2fff47dbfea6401c3944afdb7bd37b3;p=jalview.git diff --git a/src/org/biojava/dasobert/feature/FeatureTrackImpl.java b/src/org/biojava/dasobert/feature/FeatureTrackImpl.java index 8eaf6f8..a13fbb3 100644 --- a/src/org/biojava/dasobert/feature/FeatureTrackImpl.java +++ b/src/org/biojava/dasobert/feature/FeatureTrackImpl.java @@ -26,48 +26,43 @@ package org.biojava.dasobert.feature; import java.util.Iterator; -/** a class to store FeatureData and to visualize them - * coordinate system of features is always UniProt ! - * PDBresnum features served by DAS need to be converted into UniProt coord sys first. - * - * a feature consists of one or several segments. - * segmetns cotnains and information. - * +/** + * a class to store FeatureData and to visualize them coordinate system of + * features is always UniProt ! PDBresnum features served by DAS need to be + * converted into UniProt coord sys first. + * + * a feature consists of one or several segments. segmetns cotnains and + * information. + * * @author Andreas Prlic */ -public class FeatureTrackImpl -extends AbstractFeatureTrack -implements FeatureTrack +public class FeatureTrackImpl extends AbstractFeatureTrack implements + FeatureTrack { - - - public Object clone(){ - - FeatureTrack f = new FeatureTrackImpl(); - f.setName(name); - f.setMethod(method); - f.setType(type); - f.setNote(note); - f.setLink(link); - f.setSource(source); - f.setScore(score); - - Iterator iter = segments.iterator(); - - while (iter.hasNext()){ - Segment s = (Segment) iter.next(); - f.addSegment((Segment)s.clone()); - } - - return f; - - } - - -} + public Object clone() + { + FeatureTrack f = new FeatureTrackImpl(); + f.setName(name); + f.setMethod(method); + f.setType(type); + f.setNote(note); + f.setLink(link); + f.setSource(source); + f.setScore(score); + Iterator iter = segments.iterator(); + while (iter.hasNext()) + { + Segment s = (Segment) iter.next(); + f.addSegment((Segment) s.clone()); + } + return f; + + } + +}