X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fuk%2Fac%2Febi%2Fpicr%2Fmodel%2FCrossReference.java;h=821163d607d7aafe304ff9993a7faa7efe0d3e15;hb=59d682209891099d46b960509907c79e3fb276fe;hp=6fe8f8f28839a873eeb9803dc81fb5f2d7f712e1;hpb=d1b697c33b69a6dfe55df789eec5ac9881013681;p=jalview.git
diff --git a/src/uk/ac/ebi/picr/model/CrossReference.java b/src/uk/ac/ebi/picr/model/CrossReference.java
index 6fe8f8f..821163d 100644
--- a/src/uk/ac/ebi/picr/model/CrossReference.java
+++ b/src/uk/ac/ebi/picr/model/CrossReference.java
@@ -1,330 +1,330 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
- * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
- *
- * This file is part of Jalview.
- *
- * Jalview is free software: you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
- *
- * Jalview is distributed in the hope that it will be useful, but
- * WITHOUT ANY WARRANTY; without even the implied warranty
- * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
- * PURPOSE. See the GNU General Public License for more details.
- *
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
- */
-package uk.ac.ebi.picr.model;
-
-public class CrossReference implements java.io.Serializable
-{
- private java.lang.String accession;
-
- private java.lang.String accessionVersion;
-
- private java.lang.String databaseDescription;
-
- private java.lang.String databaseName;
-
- private java.util.Calendar dateAdded;
-
- private java.util.Calendar dateDeleted;
-
- private boolean deleted;
-
- private java.lang.String gi;
-
- private java.lang.String taxonId;
-
- public CrossReference()
- {
- }
-
- public CrossReference(java.lang.String accession,
- java.lang.String accessionVersion,
- java.lang.String databaseDescription,
- java.lang.String databaseName, java.util.Calendar dateAdded,
- java.util.Calendar dateDeleted, boolean deleted,
- java.lang.String gi, java.lang.String taxonId)
- {
- this.accession = accession;
- this.accessionVersion = accessionVersion;
- this.databaseDescription = databaseDescription;
- this.databaseName = databaseName;
- this.dateAdded = dateAdded;
- this.dateDeleted = dateDeleted;
- this.deleted = deleted;
- this.gi = gi;
- this.taxonId = taxonId;
- }
-
- /**
- * Gets the accession value for this CrossReference.
- *
- * @return accession
- */
- public java.lang.String getAccession()
- {
- return accession;
- }
-
- /**
- * Sets the accession value for this CrossReference.
- *
- * @param accession
- */
- public void setAccession(java.lang.String accession)
- {
- this.accession = accession;
- }
-
- /**
- * Gets the accessionVersion value for this CrossReference.
- *
- * @return accessionVersion
- */
- public java.lang.String getAccessionVersion()
- {
- return accessionVersion;
- }
-
- /**
- * Sets the accessionVersion value for this CrossReference.
- *
- * @param accessionVersion
- */
- public void setAccessionVersion(java.lang.String accessionVersion)
- {
- this.accessionVersion = accessionVersion;
- }
-
- /**
- * Gets the databaseDescription value for this CrossReference.
- *
- * @return databaseDescription
- */
- public java.lang.String getDatabaseDescription()
- {
- return databaseDescription;
- }
-
- /**
- * Sets the databaseDescription value for this CrossReference.
- *
- * @param databaseDescription
- */
- public void setDatabaseDescription(java.lang.String databaseDescription)
- {
- this.databaseDescription = databaseDescription;
- }
-
- /**
- * Gets the databaseName value for this CrossReference.
- *
- * @return databaseName
- */
- public java.lang.String getDatabaseName()
- {
- return databaseName;
- }
-
- /**
- * Sets the databaseName value for this CrossReference.
- *
- * @param databaseName
- */
- public void setDatabaseName(java.lang.String databaseName)
- {
- this.databaseName = databaseName;
- }
-
- /**
- * Gets the dateAdded value for this CrossReference.
- *
- * @return dateAdded
- */
- public java.util.Calendar getDateAdded()
- {
- return dateAdded;
- }
-
- /**
- * Sets the dateAdded value for this CrossReference.
- *
- * @param dateAdded
- */
- public void setDateAdded(java.util.Calendar dateAdded)
- {
- this.dateAdded = dateAdded;
- }
-
- /**
- * Gets the dateDeleted value for this CrossReference.
- *
- * @return dateDeleted
- */
- public java.util.Calendar getDateDeleted()
- {
- return dateDeleted;
- }
-
- /**
- * Sets the dateDeleted value for this CrossReference.
- *
- * @param dateDeleted
- */
- public void setDateDeleted(java.util.Calendar dateDeleted)
- {
- this.dateDeleted = dateDeleted;
- }
-
- /**
- * Gets the deleted value for this CrossReference.
- *
- * @return deleted
- */
- public boolean isDeleted()
- {
- return deleted;
- }
-
- /**
- * Sets the deleted value for this CrossReference.
- *
- * @param deleted
- */
- public void setDeleted(boolean deleted)
- {
- this.deleted = deleted;
- }
-
- /**
- * Gets the gi value for this CrossReference.
- *
- * @return gi
- */
- public java.lang.String getGi()
- {
- return gi;
- }
-
- /**
- * Sets the gi value for this CrossReference.
- *
- * @param gi
- */
- public void setGi(java.lang.String gi)
- {
- this.gi = gi;
- }
-
- /**
- * Gets the taxonId value for this CrossReference.
- *
- * @return taxonId
- */
- public java.lang.String getTaxonId()
- {
- return taxonId;
- }
-
- /**
- * Sets the taxonId value for this CrossReference.
- *
- * @param taxonId
- */
- public void setTaxonId(java.lang.String taxonId)
- {
- this.taxonId = taxonId;
- }
-
- private java.lang.Object __equalsCalc = null;
-
- public synchronized boolean equals(java.lang.Object obj)
- {
- if (!(obj instanceof CrossReference))
- return false;
- CrossReference other = (CrossReference) obj;
- if (obj == null)
- return false;
- if (this == obj)
- return true;
- if (__equalsCalc != null)
- {
- return (__equalsCalc == obj);
- }
- __equalsCalc = obj;
- boolean _equals;
- _equals = true
- && ((this.accession == null && other.getAccession() == null) || (this.accession != null && this.accession
- .equals(other.getAccession())))
- && ((this.accessionVersion == null && other
- .getAccessionVersion() == null) || (this.accessionVersion != null && this.accessionVersion
- .equals(other.getAccessionVersion())))
- && ((this.databaseDescription == null && other
- .getDatabaseDescription() == null) || (this.databaseDescription != null && this.databaseDescription
- .equals(other.getDatabaseDescription())))
- && ((this.databaseName == null && other.getDatabaseName() == null) || (this.databaseName != null && this.databaseName
- .equals(other.getDatabaseName())))
- && ((this.dateAdded == null && other.getDateAdded() == null) || (this.dateAdded != null && this.dateAdded
- .equals(other.getDateAdded())))
- && ((this.dateDeleted == null && other.getDateDeleted() == null) || (this.dateDeleted != null && this.dateDeleted
- .equals(other.getDateDeleted())))
- && this.deleted == other.isDeleted()
- && ((this.gi == null && other.getGi() == null) || (this.gi != null && this.gi
- .equals(other.getGi())))
- && ((this.taxonId == null && other.getTaxonId() == null) || (this.taxonId != null && this.taxonId
- .equals(other.getTaxonId())));
- __equalsCalc = null;
- return _equals;
- }
-
- private boolean __hashCodeCalc = false;
-
- public synchronized int hashCode()
- {
- if (__hashCodeCalc)
- {
- return 0;
- }
- __hashCodeCalc = true;
- int _hashCode = 1;
- if (getAccession() != null)
- {
- _hashCode += getAccession().hashCode();
- }
- if (getAccessionVersion() != null)
- {
- _hashCode += getAccessionVersion().hashCode();
- }
- if (getDatabaseDescription() != null)
- {
- _hashCode += getDatabaseDescription().hashCode();
- }
- if (getDatabaseName() != null)
- {
- _hashCode += getDatabaseName().hashCode();
- }
- if (getDateAdded() != null)
- {
- _hashCode += getDateAdded().hashCode();
- }
- if (getDateDeleted() != null)
- {
- _hashCode += getDateDeleted().hashCode();
- }
- _hashCode += (isDeleted() ? Boolean.TRUE : Boolean.FALSE).hashCode();
- if (getGi() != null)
- {
- _hashCode += getGi().hashCode();
- }
- if (getTaxonId() != null)
- {
- _hashCode += getTaxonId().hashCode();
- }
- __hashCodeCalc = false;
- return _hashCode;
- }
-
-}
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
+ * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ *
+ * This file is part of Jalview.
+ *
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *
+ * Jalview is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR
+ * PURPOSE. See the GNU General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ */
+package uk.ac.ebi.picr.model;
+
+public class CrossReference implements java.io.Serializable
+{
+ private java.lang.String accession;
+
+ private java.lang.String accessionVersion;
+
+ private java.lang.String databaseDescription;
+
+ private java.lang.String databaseName;
+
+ private java.util.Calendar dateAdded;
+
+ private java.util.Calendar dateDeleted;
+
+ private boolean deleted;
+
+ private java.lang.String gi;
+
+ private java.lang.String taxonId;
+
+ public CrossReference()
+ {
+ }
+
+ public CrossReference(java.lang.String accession,
+ java.lang.String accessionVersion,
+ java.lang.String databaseDescription,
+ java.lang.String databaseName, java.util.Calendar dateAdded,
+ java.util.Calendar dateDeleted, boolean deleted,
+ java.lang.String gi, java.lang.String taxonId)
+ {
+ this.accession = accession;
+ this.accessionVersion = accessionVersion;
+ this.databaseDescription = databaseDescription;
+ this.databaseName = databaseName;
+ this.dateAdded = dateAdded;
+ this.dateDeleted = dateDeleted;
+ this.deleted = deleted;
+ this.gi = gi;
+ this.taxonId = taxonId;
+ }
+
+ /**
+ * Gets the accession value for this CrossReference.
+ *
+ * @return accession
+ */
+ public java.lang.String getAccession()
+ {
+ return accession;
+ }
+
+ /**
+ * Sets the accession value for this CrossReference.
+ *
+ * @param accession
+ */
+ public void setAccession(java.lang.String accession)
+ {
+ this.accession = accession;
+ }
+
+ /**
+ * Gets the accessionVersion value for this CrossReference.
+ *
+ * @return accessionVersion
+ */
+ public java.lang.String getAccessionVersion()
+ {
+ return accessionVersion;
+ }
+
+ /**
+ * Sets the accessionVersion value for this CrossReference.
+ *
+ * @param accessionVersion
+ */
+ public void setAccessionVersion(java.lang.String accessionVersion)
+ {
+ this.accessionVersion = accessionVersion;
+ }
+
+ /**
+ * Gets the databaseDescription value for this CrossReference.
+ *
+ * @return databaseDescription
+ */
+ public java.lang.String getDatabaseDescription()
+ {
+ return databaseDescription;
+ }
+
+ /**
+ * Sets the databaseDescription value for this CrossReference.
+ *
+ * @param databaseDescription
+ */
+ public void setDatabaseDescription(java.lang.String databaseDescription)
+ {
+ this.databaseDescription = databaseDescription;
+ }
+
+ /**
+ * Gets the databaseName value for this CrossReference.
+ *
+ * @return databaseName
+ */
+ public java.lang.String getDatabaseName()
+ {
+ return databaseName;
+ }
+
+ /**
+ * Sets the databaseName value for this CrossReference.
+ *
+ * @param databaseName
+ */
+ public void setDatabaseName(java.lang.String databaseName)
+ {
+ this.databaseName = databaseName;
+ }
+
+ /**
+ * Gets the dateAdded value for this CrossReference.
+ *
+ * @return dateAdded
+ */
+ public java.util.Calendar getDateAdded()
+ {
+ return dateAdded;
+ }
+
+ /**
+ * Sets the dateAdded value for this CrossReference.
+ *
+ * @param dateAdded
+ */
+ public void setDateAdded(java.util.Calendar dateAdded)
+ {
+ this.dateAdded = dateAdded;
+ }
+
+ /**
+ * Gets the dateDeleted value for this CrossReference.
+ *
+ * @return dateDeleted
+ */
+ public java.util.Calendar getDateDeleted()
+ {
+ return dateDeleted;
+ }
+
+ /**
+ * Sets the dateDeleted value for this CrossReference.
+ *
+ * @param dateDeleted
+ */
+ public void setDateDeleted(java.util.Calendar dateDeleted)
+ {
+ this.dateDeleted = dateDeleted;
+ }
+
+ /**
+ * Gets the deleted value for this CrossReference.
+ *
+ * @return deleted
+ */
+ public boolean isDeleted()
+ {
+ return deleted;
+ }
+
+ /**
+ * Sets the deleted value for this CrossReference.
+ *
+ * @param deleted
+ */
+ public void setDeleted(boolean deleted)
+ {
+ this.deleted = deleted;
+ }
+
+ /**
+ * Gets the gi value for this CrossReference.
+ *
+ * @return gi
+ */
+ public java.lang.String getGi()
+ {
+ return gi;
+ }
+
+ /**
+ * Sets the gi value for this CrossReference.
+ *
+ * @param gi
+ */
+ public void setGi(java.lang.String gi)
+ {
+ this.gi = gi;
+ }
+
+ /**
+ * Gets the taxonId value for this CrossReference.
+ *
+ * @return taxonId
+ */
+ public java.lang.String getTaxonId()
+ {
+ return taxonId;
+ }
+
+ /**
+ * Sets the taxonId value for this CrossReference.
+ *
+ * @param taxonId
+ */
+ public void setTaxonId(java.lang.String taxonId)
+ {
+ this.taxonId = taxonId;
+ }
+
+ private java.lang.Object __equalsCalc = null;
+
+ public synchronized boolean equals(java.lang.Object obj)
+ {
+ if (!(obj instanceof CrossReference))
+ return false;
+ CrossReference other = (CrossReference) obj;
+ if (obj == null)
+ return false;
+ if (this == obj)
+ return true;
+ if (__equalsCalc != null)
+ {
+ return (__equalsCalc == obj);
+ }
+ __equalsCalc = obj;
+ boolean _equals;
+ _equals = true
+ && ((this.accession == null && other.getAccession() == null) || (this.accession != null && this.accession
+ .equals(other.getAccession())))
+ && ((this.accessionVersion == null && other
+ .getAccessionVersion() == null) || (this.accessionVersion != null && this.accessionVersion
+ .equals(other.getAccessionVersion())))
+ && ((this.databaseDescription == null && other
+ .getDatabaseDescription() == null) || (this.databaseDescription != null && this.databaseDescription
+ .equals(other.getDatabaseDescription())))
+ && ((this.databaseName == null && other.getDatabaseName() == null) || (this.databaseName != null && this.databaseName
+ .equals(other.getDatabaseName())))
+ && ((this.dateAdded == null && other.getDateAdded() == null) || (this.dateAdded != null && this.dateAdded
+ .equals(other.getDateAdded())))
+ && ((this.dateDeleted == null && other.getDateDeleted() == null) || (this.dateDeleted != null && this.dateDeleted
+ .equals(other.getDateDeleted())))
+ && this.deleted == other.isDeleted()
+ && ((this.gi == null && other.getGi() == null) || (this.gi != null && this.gi
+ .equals(other.getGi())))
+ && ((this.taxonId == null && other.getTaxonId() == null) || (this.taxonId != null && this.taxonId
+ .equals(other.getTaxonId())));
+ __equalsCalc = null;
+ return _equals;
+ }
+
+ private boolean __hashCodeCalc = false;
+
+ public synchronized int hashCode()
+ {
+ if (__hashCodeCalc)
+ {
+ return 0;
+ }
+ __hashCodeCalc = true;
+ int _hashCode = 1;
+ if (getAccession() != null)
+ {
+ _hashCode += getAccession().hashCode();
+ }
+ if (getAccessionVersion() != null)
+ {
+ _hashCode += getAccessionVersion().hashCode();
+ }
+ if (getDatabaseDescription() != null)
+ {
+ _hashCode += getDatabaseDescription().hashCode();
+ }
+ if (getDatabaseName() != null)
+ {
+ _hashCode += getDatabaseName().hashCode();
+ }
+ if (getDateAdded() != null)
+ {
+ _hashCode += getDateAdded().hashCode();
+ }
+ if (getDateDeleted() != null)
+ {
+ _hashCode += getDateDeleted().hashCode();
+ }
+ _hashCode += (isDeleted() ? Boolean.TRUE : Boolean.FALSE).hashCode();
+ if (getGi() != null)
+ {
+ _hashCode += getGi().hashCode();
+ }
+ if (getTaxonId() != null)
+ {
+ _hashCode += getTaxonId().hashCode();
+ }
+ __hashCodeCalc = false;
+ return _hashCode;
+ }
+
+}