X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fuk%2Fac%2Febi%2Fwww%2Fpicr%2FAccessionMappingService%2FAccessionMapperBindingStub.java;h=4e3d516fff5e26f22119256afb38e6f2c3b99dde;hb=ab43013b7e357b84b4abade0dba949668dfb2a0e;hp=e31f2886e96373d62fa883cae281c5b5f02fc5ec;hpb=bd4bd354d62b1c3aba6c42574219856f56333f9d;p=jalview.git

diff --git a/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java b/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
index e31f288..4e3d516 100644
--- a/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
+++ b/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
@@ -1,254 +1,400 @@
-/**
- * AccessionMapperBindingStub.java
- *
- * This file was auto-generated from WSDL
- * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
- */
-
-package uk.ac.ebi.www.picr.AccessionMappingService;
-
-public class AccessionMapperBindingStub extends org.apache.axis.client.Stub implements uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface {
-    private java.util.Vector cachedSerClasses = new java.util.Vector();
-    private java.util.Vector cachedSerQNames = new java.util.Vector();
-    private java.util.Vector cachedSerFactories = new java.util.Vector();
-    private java.util.Vector cachedDeserFactories = new java.util.Vector();
-
-    static org.apache.axis.description.OperationDesc [] _operations;
-
-    static {
-        _operations = new org.apache.axis.description.OperationDesc[3];
-        _initOperationDesc1();
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.2b1)
+ * Copyright (C) 2014 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package uk.ac.ebi.www.picr.AccessionMappingService;
+
+public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
+        implements
+        uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface
+{
+  private java.util.Vector cachedSerClasses = new java.util.Vector();
+
+  private java.util.Vector cachedSerQNames = new java.util.Vector();
+
+  private java.util.Vector cachedSerFactories = new java.util.Vector();
+
+  private java.util.Vector cachedDeserFactories = new java.util.Vector();
+
+  static org.apache.axis.description.OperationDesc[] _operations;
+
+  static
+  {
+    _operations = new org.apache.axis.description.OperationDesc[3];
+    _initOperationDesc1();
+  }
+
+  private static void _initOperationDesc1()
+  {
+    org.apache.axis.description.OperationDesc oper;
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getUPIForSequence");
+    oper.addParameter(
+            new javax.xml.namespace.QName(
+                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
+                    "sequence"), new javax.xml.namespace.QName(
+                    "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "searchDatabases"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String[].class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(
+            new javax.xml.namespace.QName(
+                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
+                    "taxonId"), new javax.xml.namespace.QName(
+                    "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "onlyActive"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+            "http://model.picr.ebi.ac.uk", "UPEntry"));
+    oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);
+    oper.setReturnQName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForSequenceReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
+    oper.setUse(org.apache.axis.constants.Use.LITERAL);
+    _operations[0] = oper;
+
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getUPIForAccession");
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "accession"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "ac_version"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "searchDatabases"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String[].class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(
+            new javax.xml.namespace.QName(
+                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
+                    "taxonId"), new javax.xml.namespace.QName(
+                    "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "onlyActive"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+            "http://model.picr.ebi.ac.uk", "UPEntry"));
+    oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);
+    oper.setReturnQName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForAccessionReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
+    oper.setUse(org.apache.axis.constants.Use.LITERAL);
+    _operations[1] = oper;
+
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getMappedDatabaseNames");
+    oper.setReturnType(new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"));
+    oper.setReturnClass(java.lang.String[].class);
+    oper.setReturnQName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "mappedDatabases"));
+    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
+    oper.setUse(org.apache.axis.constants.Use.LITERAL);
+    _operations[2] = oper;
+
+  }
+
+  public AccessionMapperBindingStub() throws org.apache.axis.AxisFault
+  {
+    this(null);
+  }
+
+  public AccessionMapperBindingStub(java.net.URL endpointURL,
+          javax.xml.rpc.Service service) throws org.apache.axis.AxisFault
+  {
+    this(service);
+    super.cachedEndpoint = endpointURL;
+  }
+
+  public AccessionMapperBindingStub(javax.xml.rpc.Service service)
+          throws org.apache.axis.AxisFault
+  {
+    if (service == null)
+    {
+      super.service = new org.apache.axis.client.Service();
     }
-
-    private static void _initOperationDesc1(){
-        org.apache.axis.description.OperationDesc oper;
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("getUPIForSequence");
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "sequence"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "searchDatabases"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String[].class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "onlyActive"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.setReturnType(new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry"));
-        oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);
-        oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForSequenceReturn"));
-        oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
-        oper.setUse(org.apache.axis.constants.Use.LITERAL);
-        _operations[0] = oper;
-
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("getUPIForAccession");
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "accession"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "ac_version"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "searchDatabases"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String[].class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.addParameter(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "onlyActive"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.setReturnType(new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry"));
-        oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);
-        oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForAccessionReturn"));
-        oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
-        oper.setUse(org.apache.axis.constants.Use.LITERAL);
-        _operations[1] = oper;
-
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("getMappedDatabaseNames");
-        oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
-        oper.setReturnClass(java.lang.String[].class);
-        oper.setReturnQName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "mappedDatabases"));
-        oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
-        oper.setUse(org.apache.axis.constants.Use.LITERAL);
-        _operations[2] = oper;
-
-    }
-
-    public AccessionMapperBindingStub() throws org.apache.axis.AxisFault {
-         this(null);
-    }
-
-    public AccessionMapperBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
-         this(service);
-         super.cachedEndpoint = endpointURL;
-    }
-
-    public AccessionMapperBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
-        if (service == null) {
-            super.service = new org.apache.axis.client.Service();
-        } else {
-            super.service = service;
-        }
-            java.lang.Class cls;
-            javax.xml.namespace.QName qName;
-            java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
-            java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
-            java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
-            java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
-            java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
-            java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
-            java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
-            java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
-            java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
-            java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
-            qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "UPEntry");
-            cachedSerQNames.add(qName);
-            cls = uk.ac.ebi.picr.model.UPEntry.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
-
-            qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk", "CrossReference");
-            cachedSerQNames.add(qName);
-            cls = uk.ac.ebi.picr.model.CrossReference.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
-
-    }
-
-    protected org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {
-        try {
-            org.apache.axis.client.Call _call =
-                    (org.apache.axis.client.Call) super.service.createCall();
-            if (super.maintainSessionSet) {
-                _call.setMaintainSession(super.maintainSession);
-            }
-            if (super.cachedUsername != null) {
-                _call.setUsername(super.cachedUsername);
-            }
-            if (super.cachedPassword != null) {
-                _call.setPassword(super.cachedPassword);
-            }
-            if (super.cachedEndpoint != null) {
-                _call.setTargetEndpointAddress(super.cachedEndpoint);
-            }
-            if (super.cachedTimeout != null) {
-                _call.setTimeout(super.cachedTimeout);
-            }
-            if (super.cachedPortName != null) {
-                _call.setPortName(super.cachedPortName);
-            }
-            java.util.Enumeration keys = super.cachedProperties.keys();
-            while (keys.hasMoreElements()) {
-                java.lang.String key = (java.lang.String) keys.nextElement();
-                _call.setProperty(key, super.cachedProperties.get(key));
-            }
-            // All the type mapping information is registered
-            // when the first call is made.
-            // The type mapping information is actually registered in
-            // the TypeMappingRegistry of the service, which
-            // is the reason why registration is only needed for the first call.
-            synchronized (this) {
-                if (firstCall()) {
-                    // must set encoding style before registering serializers
-                    _call.setEncodingStyle(null);
-                    for (int i = 0; i < cachedSerFactories.size(); ++i) {
-                        java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
-                        javax.xml.namespace.QName qName =
-                                (javax.xml.namespace.QName) cachedSerQNames.get(i);
-                        java.lang.Class sf = (java.lang.Class)
-                                 cachedSerFactories.get(i);
-                        java.lang.Class df = (java.lang.Class)
-                                 cachedDeserFactories.get(i);
-                        _call.registerTypeMapping(cls, qName, sf, df, false);
-                    }
-                }
-            }
-            return _call;
-        }
-        catch (java.lang.Throwable _t) {
-            throw new org.apache.axis.AxisFault("Failure trying to get the Call object", _t);
-        }
-    }
-
-    public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(java.lang.String sequence, java.lang.String[] searchDatabases, java.lang.String taxonId, boolean onlyActive) throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[0]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("getUPIForSequence");
-        _call.setEncodingStyle(null);
-        _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
-        _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForSequence"));
-
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {sequence, searchDatabases, taxonId, new java.lang.Boolean(onlyActive)});
-
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (uk.ac.ebi.picr.model.UPEntry) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (uk.ac.ebi.picr.model.UPEntry) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.picr.model.UPEntry.class);
-            }
-        }
-    }
-
-    public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(java.lang.String accession, java.lang.String ac_version, java.lang.String[] searchDatabases, java.lang.String taxonId, boolean onlyActive) throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[1]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("getUPIForAccession");
-        _call.setEncodingStyle(null);
-        _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
-        _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getUPIForAccession"));
-
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {accession, ac_version, searchDatabases, taxonId, new java.lang.Boolean(onlyActive)});
-
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (uk.ac.ebi.picr.model.UPEntry[]) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (uk.ac.ebi.picr.model.UPEntry[]) org.apache.axis.utils.JavaUtils.convert(_resp, uk.ac.ebi.picr.model.UPEntry[].class);
-            }
-        }
-    }
-
-    public java.lang.String[] getMappedDatabaseNames() throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[2]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("getMappedDatabaseNames");
-        _call.setEncodingStyle(null);
-        _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR, Boolean.FALSE);
-        _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS, Boolean.FALSE);
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("http://www.ebi.ac.uk/picr/AccessionMappingService", "getMappedDatabaseNames"));
-
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {});
-
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (java.lang.String[]) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (java.lang.String[]) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String[].class);
-            }
-        }
-    }
-
-}
+    else
+    {
+      super.service = service;
+    }
+    java.lang.Class cls;
+    javax.xml.namespace.QName qName;
+    java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
+    java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
+    java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
+    java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
+    java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
+    java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
+    java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
+    java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
+    java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
+    java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
+    qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk",
+            "UPEntry");
+    cachedSerQNames.add(qName);
+    cls = uk.ac.ebi.picr.model.UPEntry.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
+
+    qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk",
+            "CrossReference");
+    cachedSerQNames.add(qName);
+    cls = uk.ac.ebi.picr.model.CrossReference.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
+
+  }
+
+  protected org.apache.axis.client.Call createCall()
+          throws java.rmi.RemoteException
+  {
+    try
+    {
+      org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service
+              .createCall();
+      if (super.maintainSessionSet)
+      {
+        _call.setMaintainSession(super.maintainSession);
+      }
+      if (super.cachedUsername != null)
+      {
+        _call.setUsername(super.cachedUsername);
+      }
+      if (super.cachedPassword != null)
+      {
+        _call.setPassword(super.cachedPassword);
+      }
+      if (super.cachedEndpoint != null)
+      {
+        _call.setTargetEndpointAddress(super.cachedEndpoint);
+      }
+      if (super.cachedTimeout != null)
+      {
+        _call.setTimeout(super.cachedTimeout);
+      }
+      if (super.cachedPortName != null)
+      {
+        _call.setPortName(super.cachedPortName);
+      }
+      java.util.Enumeration keys = super.cachedProperties.keys();
+      while (keys.hasMoreElements())
+      {
+        java.lang.String key = (java.lang.String) keys.nextElement();
+        _call.setProperty(key, super.cachedProperties.get(key));
+      }
+      // All the type mapping information is registered
+      // when the first call is made.
+      // The type mapping information is actually registered in
+      // the TypeMappingRegistry of the service, which
+      // is the reason why registration is only needed for the first call.
+      synchronized (this)
+      {
+        if (firstCall())
+        {
+          // must set encoding style before registering serializers
+          _call.setEncodingStyle(null);
+          for (int i = 0; i < cachedSerFactories.size(); ++i)
+          {
+            java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
+            javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames
+                    .get(i);
+            java.lang.Class sf = (java.lang.Class) cachedSerFactories
+                    .get(i);
+            java.lang.Class df = (java.lang.Class) cachedDeserFactories
+                    .get(i);
+            _call.registerTypeMapping(cls, qName, sf, df, false);
+          }
+        }
+      }
+      return _call;
+    } catch (java.lang.Throwable _t)
+    {
+      throw new org.apache.axis.AxisFault(
+              "Failure trying to get the Call object", _t);
+    }
+  }
+
+  public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(
+          java.lang.String sequence, java.lang.String[] searchDatabases,
+          java.lang.String taxonId, boolean onlyActive)
+          throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[0]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("getUPIForSequence");
+    _call.setEncodingStyle(null);
+    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
+            Boolean.FALSE);
+    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
+            Boolean.FALSE);
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForSequence"));
+
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call
+            .invoke(new java.lang.Object[]
+            { sequence, searchDatabases, taxonId,
+                new java.lang.Boolean(onlyActive) });
+
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (uk.ac.ebi.picr.model.UPEntry) _resp;
+      } catch (java.lang.Exception _exception)
+      {
+        return (uk.ac.ebi.picr.model.UPEntry) org.apache.axis.utils.JavaUtils
+                .convert(_resp, uk.ac.ebi.picr.model.UPEntry.class);
+      }
+    }
+  }
+
+  public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(
+          java.lang.String accession, java.lang.String ac_version,
+          java.lang.String[] searchDatabases, java.lang.String taxonId,
+          boolean onlyActive) throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[1]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("getUPIForAccession");
+    _call.setEncodingStyle(null);
+    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
+            Boolean.FALSE);
+    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
+            Boolean.FALSE);
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForAccession"));
+
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
+    { accession, ac_version, searchDatabases, taxonId,
+        new java.lang.Boolean(onlyActive) });
+
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (uk.ac.ebi.picr.model.UPEntry[]) _resp;
+      } catch (java.lang.Exception _exception)
+      {
+        return (uk.ac.ebi.picr.model.UPEntry[]) org.apache.axis.utils.JavaUtils
+                .convert(_resp, uk.ac.ebi.picr.model.UPEntry[].class);
+      }
+    }
+  }
+
+  public java.lang.String[] getMappedDatabaseNames()
+          throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[2]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("getMappedDatabaseNames");
+    _call.setEncodingStyle(null);
+    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
+            Boolean.FALSE);
+    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
+            Boolean.FALSE);
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getMappedDatabaseNames"));
+
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
+    {});
+
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (java.lang.String[]) _resp;
+      } catch (java.lang.Exception _exception)
+      {
+        return (java.lang.String[]) org.apache.axis.utils.JavaUtils
+                .convert(_resp, java.lang.String[].class);
+      }
+    }
+  }
+
+}