X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fuk%2Fac%2Febi%2Fwww%2Fpicr%2FAccessionMappingService%2FAccessionMapperBindingStub.java;h=5391221bdb4d82071b6144899a4212ef54fb4e31;hb=37de9310bec3501cbc6381e0c3dcb282fcaad812;hp=5c18d7746cf79c1a88955868fd6c7e2b7d19c3ff;hpb=2de8acfae59aced665e4c37ad0f7dcc2ed68818e;p=jalview.git

diff --git a/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java b/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
index 5c18d77..5391221 100644
--- a/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
+++ b/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
@@ -1,401 +1,398 @@
-/*
- * Jalview - A Sequence Alignment Editor and Viewer (Development Version 2.4.1)
- * Copyright (C) 2009 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
- * 
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
- * 
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU General Public License for more details.
- * 
- * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
- */
-package uk.ac.ebi.www.picr.AccessionMappingService;
-
-public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
-        implements
-        uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface
-{
-  private java.util.Vector cachedSerClasses = new java.util.Vector();
-
-  private java.util.Vector cachedSerQNames = new java.util.Vector();
-
-  private java.util.Vector cachedSerFactories = new java.util.Vector();
-
-  private java.util.Vector cachedDeserFactories = new java.util.Vector();
-
-  static org.apache.axis.description.OperationDesc[] _operations;
-
-  static
-  {
-    _operations = new org.apache.axis.description.OperationDesc[3];
-    _initOperationDesc1();
-  }
-
-  private static void _initOperationDesc1()
-  {
-    org.apache.axis.description.OperationDesc oper;
-    oper = new org.apache.axis.description.OperationDesc();
-    oper.setName("getUPIForSequence");
-    oper.addParameter(
-            new javax.xml.namespace.QName(
-                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
-                    "sequence"), new javax.xml.namespace.QName(
-                    "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "searchDatabases"), new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String[].class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(
-            new javax.xml.namespace.QName(
-                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
-                    "taxonId"), new javax.xml.namespace.QName(
-                    "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "onlyActive"), new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.setReturnType(new javax.xml.namespace.QName(
-            "http://model.picr.ebi.ac.uk", "UPEntry"));
-    oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);
-    oper.setReturnQName(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "getUPIForSequenceReturn"));
-    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
-    oper.setUse(org.apache.axis.constants.Use.LITERAL);
-    _operations[0] = oper;
-
-    oper = new org.apache.axis.description.OperationDesc();
-    oper.setName("getUPIForAccession");
-    oper.addParameter(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "accession"), new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "ac_version"), new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "searchDatabases"), new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String[].class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(
-            new javax.xml.namespace.QName(
-                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
-                    "taxonId"), new javax.xml.namespace.QName(
-                    "http://www.w3.org/2001/XMLSchema", "string"),
-            java.lang.String.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.addParameter(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "onlyActive"), new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
-            org.apache.axis.description.ParameterDesc.IN, false, false);
-    oper.setReturnType(new javax.xml.namespace.QName(
-            "http://model.picr.ebi.ac.uk", "UPEntry"));
-    oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);
-    oper.setReturnQName(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "getUPIForAccessionReturn"));
-    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
-    oper.setUse(org.apache.axis.constants.Use.LITERAL);
-    _operations[1] = oper;
-
-    oper = new org.apache.axis.description.OperationDesc();
-    oper.setName("getMappedDatabaseNames");
-    oper.setReturnType(new javax.xml.namespace.QName(
-            "http://www.w3.org/2001/XMLSchema", "string"));
-    oper.setReturnClass(java.lang.String[].class);
-    oper.setReturnQName(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "mappedDatabases"));
-    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
-    oper.setUse(org.apache.axis.constants.Use.LITERAL);
-    _operations[2] = oper;
-
-  }
-
-  public AccessionMapperBindingStub() throws org.apache.axis.AxisFault
-  {
-    this(null);
-  }
-
-  public AccessionMapperBindingStub(java.net.URL endpointURL,
-          javax.xml.rpc.Service service) throws org.apache.axis.AxisFault
-  {
-    this(service);
-    super.cachedEndpoint = endpointURL;
-  }
-
-  public AccessionMapperBindingStub(javax.xml.rpc.Service service)
-          throws org.apache.axis.AxisFault
-  {
-    if (service == null)
-    {
-      super.service = new org.apache.axis.client.Service();
-    }
-    else
-    {
-      super.service = service;
-    }
-    java.lang.Class cls;
-    javax.xml.namespace.QName qName;
-    java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
-    java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
-    java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
-    java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
-    java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
-    java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
-    java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
-    java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
-    java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
-    java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
-    qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk",
-            "UPEntry");
-    cachedSerQNames.add(qName);
-    cls = uk.ac.ebi.picr.model.UPEntry.class;
-    cachedSerClasses.add(cls);
-    cachedSerFactories.add(beansf);
-    cachedDeserFactories.add(beandf);
-
-    qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk",
-            "CrossReference");
-    cachedSerQNames.add(qName);
-    cls = uk.ac.ebi.picr.model.CrossReference.class;
-    cachedSerClasses.add(cls);
-    cachedSerFactories.add(beansf);
-    cachedDeserFactories.add(beandf);
-
-  }
-
-  protected org.apache.axis.client.Call createCall()
-          throws java.rmi.RemoteException
-  {
-    try
-    {
-      org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service
-              .createCall();
-      if (super.maintainSessionSet)
-      {
-        _call.setMaintainSession(super.maintainSession);
-      }
-      if (super.cachedUsername != null)
-      {
-        _call.setUsername(super.cachedUsername);
-      }
-      if (super.cachedPassword != null)
-      {
-        _call.setPassword(super.cachedPassword);
-      }
-      if (super.cachedEndpoint != null)
-      {
-        _call.setTargetEndpointAddress(super.cachedEndpoint);
-      }
-      if (super.cachedTimeout != null)
-      {
-        _call.setTimeout(super.cachedTimeout);
-      }
-      if (super.cachedPortName != null)
-      {
-        _call.setPortName(super.cachedPortName);
-      }
-      java.util.Enumeration keys = super.cachedProperties.keys();
-      while (keys.hasMoreElements())
-      {
-        java.lang.String key = (java.lang.String) keys.nextElement();
-        _call.setProperty(key, super.cachedProperties.get(key));
-      }
-      // All the type mapping information is registered
-      // when the first call is made.
-      // The type mapping information is actually registered in
-      // the TypeMappingRegistry of the service, which
-      // is the reason why registration is only needed for the first call.
-      synchronized (this)
-      {
-        if (firstCall())
-        {
-          // must set encoding style before registering serializers
-          _call.setEncodingStyle(null);
-          for (int i = 0; i < cachedSerFactories.size(); ++i)
-          {
-            java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
-            javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames
-                    .get(i);
-            java.lang.Class sf = (java.lang.Class) cachedSerFactories
-                    .get(i);
-            java.lang.Class df = (java.lang.Class) cachedDeserFactories
-                    .get(i);
-            _call.registerTypeMapping(cls, qName, sf, df, false);
-          }
-        }
-      }
-      return _call;
-    } catch (java.lang.Throwable _t)
-    {
-      throw new org.apache.axis.AxisFault(
-              "Failure trying to get the Call object", _t);
-    }
-  }
-
-  public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(
-          java.lang.String sequence, java.lang.String[] searchDatabases,
-          java.lang.String taxonId, boolean onlyActive)
-          throws java.rmi.RemoteException
-  {
-    if (super.cachedEndpoint == null)
-    {
-      throw new org.apache.axis.NoEndPointException();
-    }
-    org.apache.axis.client.Call _call = createCall();
-    _call.setOperation(_operations[0]);
-    _call.setUseSOAPAction(true);
-    _call.setSOAPActionURI("getUPIForSequence");
-    _call.setEncodingStyle(null);
-    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
-            Boolean.FALSE);
-    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
-            Boolean.FALSE);
-    _call
-            .setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-    _call.setOperationName(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "getUPIForSequence"));
-
-    setRequestHeaders(_call);
-    setAttachments(_call);
-    java.lang.Object _resp = _call
-            .invoke(new java.lang.Object[]
-            { sequence, searchDatabases, taxonId,
-                new java.lang.Boolean(onlyActive) });
-
-    if (_resp instanceof java.rmi.RemoteException)
-    {
-      throw (java.rmi.RemoteException) _resp;
-    }
-    else
-    {
-      extractAttachments(_call);
-      try
-      {
-        return (uk.ac.ebi.picr.model.UPEntry) _resp;
-      } catch (java.lang.Exception _exception)
-      {
-        return (uk.ac.ebi.picr.model.UPEntry) org.apache.axis.utils.JavaUtils
-                .convert(_resp, uk.ac.ebi.picr.model.UPEntry.class);
-      }
-    }
-  }
-
-  public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(
-          java.lang.String accession, java.lang.String ac_version,
-          java.lang.String[] searchDatabases, java.lang.String taxonId,
-          boolean onlyActive) throws java.rmi.RemoteException
-  {
-    if (super.cachedEndpoint == null)
-    {
-      throw new org.apache.axis.NoEndPointException();
-    }
-    org.apache.axis.client.Call _call = createCall();
-    _call.setOperation(_operations[1]);
-    _call.setUseSOAPAction(true);
-    _call.setSOAPActionURI("getUPIForAccession");
-    _call.setEncodingStyle(null);
-    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
-            Boolean.FALSE);
-    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
-            Boolean.FALSE);
-    _call
-            .setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-    _call.setOperationName(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "getUPIForAccession"));
-
-    setRequestHeaders(_call);
-    setAttachments(_call);
-    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
-    { accession, ac_version, searchDatabases, taxonId,
-        new java.lang.Boolean(onlyActive) });
-
-    if (_resp instanceof java.rmi.RemoteException)
-    {
-      throw (java.rmi.RemoteException) _resp;
-    }
-    else
-    {
-      extractAttachments(_call);
-      try
-      {
-        return (uk.ac.ebi.picr.model.UPEntry[]) _resp;
-      } catch (java.lang.Exception _exception)
-      {
-        return (uk.ac.ebi.picr.model.UPEntry[]) org.apache.axis.utils.JavaUtils
-                .convert(_resp, uk.ac.ebi.picr.model.UPEntry[].class);
-      }
-    }
-  }
-
-  public java.lang.String[] getMappedDatabaseNames()
-          throws java.rmi.RemoteException
-  {
-    if (super.cachedEndpoint == null)
-    {
-      throw new org.apache.axis.NoEndPointException();
-    }
-    org.apache.axis.client.Call _call = createCall();
-    _call.setOperation(_operations[2]);
-    _call.setUseSOAPAction(true);
-    _call.setSOAPActionURI("getMappedDatabaseNames");
-    _call.setEncodingStyle(null);
-    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
-            Boolean.FALSE);
-    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
-            Boolean.FALSE);
-    _call
-            .setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-    _call.setOperationName(new javax.xml.namespace.QName(
-            "http://www.ebi.ac.uk/picr/AccessionMappingService",
-            "getMappedDatabaseNames"));
-
-    setRequestHeaders(_call);
-    setAttachments(_call);
-    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
-    {});
-
-    if (_resp instanceof java.rmi.RemoteException)
-    {
-      throw (java.rmi.RemoteException) _resp;
-    }
-    else
-    {
-      extractAttachments(_call);
-      try
-      {
-        return (java.lang.String[]) _resp;
-      } catch (java.lang.Exception _exception)
-      {
-        return (java.lang.String[]) org.apache.axis.utils.JavaUtils
-                .convert(_resp, java.lang.String[].class);
-      }
-    }
-  }
-
-}
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ */
+package uk.ac.ebi.www.picr.AccessionMappingService;
+
+public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
+        implements
+        uk.ac.ebi.www.picr.AccessionMappingService.AccessionMapperInterface
+{
+  private java.util.Vector cachedSerClasses = new java.util.Vector();
+
+  private java.util.Vector cachedSerQNames = new java.util.Vector();
+
+  private java.util.Vector cachedSerFactories = new java.util.Vector();
+
+  private java.util.Vector cachedDeserFactories = new java.util.Vector();
+
+  static org.apache.axis.description.OperationDesc[] _operations;
+
+  static
+  {
+    _operations = new org.apache.axis.description.OperationDesc[3];
+    _initOperationDesc1();
+  }
+
+  private static void _initOperationDesc1()
+  {
+    org.apache.axis.description.OperationDesc oper;
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getUPIForSequence");
+    oper.addParameter(
+            new javax.xml.namespace.QName(
+                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
+                    "sequence"), new javax.xml.namespace.QName(
+                    "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "searchDatabases"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String[].class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(
+            new javax.xml.namespace.QName(
+                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
+                    "taxonId"), new javax.xml.namespace.QName(
+                    "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "onlyActive"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+            "http://model.picr.ebi.ac.uk", "UPEntry"));
+    oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);
+    oper.setReturnQName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForSequenceReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
+    oper.setUse(org.apache.axis.constants.Use.LITERAL);
+    _operations[0] = oper;
+
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getUPIForAccession");
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "accession"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "ac_version"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "searchDatabases"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String[].class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(
+            new javax.xml.namespace.QName(
+                    "http://www.ebi.ac.uk/picr/AccessionMappingService",
+                    "taxonId"), new javax.xml.namespace.QName(
+                    "http://www.w3.org/2001/XMLSchema", "string"),
+            java.lang.String.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.addParameter(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "onlyActive"), new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
+            org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+            "http://model.picr.ebi.ac.uk", "UPEntry"));
+    oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);
+    oper.setReturnQName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForAccessionReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
+    oper.setUse(org.apache.axis.constants.Use.LITERAL);
+    _operations[1] = oper;
+
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getMappedDatabaseNames");
+    oper.setReturnType(new javax.xml.namespace.QName(
+            "http://www.w3.org/2001/XMLSchema", "string"));
+    oper.setReturnClass(java.lang.String[].class);
+    oper.setReturnQName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "mappedDatabases"));
+    oper.setStyle(org.apache.axis.constants.Style.WRAPPED);
+    oper.setUse(org.apache.axis.constants.Use.LITERAL);
+    _operations[2] = oper;
+
+  }
+
+  public AccessionMapperBindingStub() throws org.apache.axis.AxisFault
+  {
+    this(null);
+  }
+
+  public AccessionMapperBindingStub(java.net.URL endpointURL,
+          javax.xml.rpc.Service service) throws org.apache.axis.AxisFault
+  {
+    this(service);
+    super.cachedEndpoint = endpointURL;
+  }
+
+  public AccessionMapperBindingStub(javax.xml.rpc.Service service)
+          throws org.apache.axis.AxisFault
+  {
+    if (service == null)
+    {
+      super.service = new org.apache.axis.client.Service();
+    }
+    else
+    {
+      super.service = service;
+    }
+    java.lang.Class cls;
+    javax.xml.namespace.QName qName;
+    java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
+    java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
+    java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
+    java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
+    java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
+    java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
+    java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
+    java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
+    java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
+    java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;
+    qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk",
+            "UPEntry");
+    cachedSerQNames.add(qName);
+    cls = uk.ac.ebi.picr.model.UPEntry.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
+
+    qName = new javax.xml.namespace.QName("http://model.picr.ebi.ac.uk",
+            "CrossReference");
+    cachedSerQNames.add(qName);
+    cls = uk.ac.ebi.picr.model.CrossReference.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
+
+  }
+
+  protected org.apache.axis.client.Call createCall()
+          throws java.rmi.RemoteException
+  {
+    try
+    {
+      org.apache.axis.client.Call _call = (org.apache.axis.client.Call) super.service
+              .createCall();
+      if (super.maintainSessionSet)
+      {
+        _call.setMaintainSession(super.maintainSession);
+      }
+      if (super.cachedUsername != null)
+      {
+        _call.setUsername(super.cachedUsername);
+      }
+      if (super.cachedPassword != null)
+      {
+        _call.setPassword(super.cachedPassword);
+      }
+      if (super.cachedEndpoint != null)
+      {
+        _call.setTargetEndpointAddress(super.cachedEndpoint);
+      }
+      if (super.cachedTimeout != null)
+      {
+        _call.setTimeout(super.cachedTimeout);
+      }
+      if (super.cachedPortName != null)
+      {
+        _call.setPortName(super.cachedPortName);
+      }
+      java.util.Enumeration keys = super.cachedProperties.keys();
+      while (keys.hasMoreElements())
+      {
+        java.lang.String key = (java.lang.String) keys.nextElement();
+        _call.setProperty(key, super.cachedProperties.get(key));
+      }
+      // All the type mapping information is registered
+      // when the first call is made.
+      // The type mapping information is actually registered in
+      // the TypeMappingRegistry of the service, which
+      // is the reason why registration is only needed for the first call.
+      synchronized (this)
+      {
+        if (firstCall())
+        {
+          // must set encoding style before registering serializers
+          _call.setEncodingStyle(null);
+          for (int i = 0; i < cachedSerFactories.size(); ++i)
+          {
+            java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
+            javax.xml.namespace.QName qName = (javax.xml.namespace.QName) cachedSerQNames
+                    .get(i);
+            java.lang.Class sf = (java.lang.Class) cachedSerFactories
+                    .get(i);
+            java.lang.Class df = (java.lang.Class) cachedDeserFactories
+                    .get(i);
+            _call.registerTypeMapping(cls, qName, sf, df, false);
+          }
+        }
+      }
+      return _call;
+    } catch (java.lang.Throwable _t)
+    {
+      throw new org.apache.axis.AxisFault(
+              "Failure trying to get the Call object", _t);
+    }
+  }
+
+  public uk.ac.ebi.picr.model.UPEntry getUPIForSequence(
+          java.lang.String sequence, java.lang.String[] searchDatabases,
+          java.lang.String taxonId, boolean onlyActive)
+          throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[0]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("getUPIForSequence");
+    _call.setEncodingStyle(null);
+    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
+            Boolean.FALSE);
+    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
+            Boolean.FALSE);
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForSequence"));
+
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[] {
+        sequence, searchDatabases, taxonId,
+        new java.lang.Boolean(onlyActive) });
+
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (uk.ac.ebi.picr.model.UPEntry) _resp;
+      } catch (java.lang.Exception _exception)
+      {
+        return (uk.ac.ebi.picr.model.UPEntry) org.apache.axis.utils.JavaUtils
+                .convert(_resp, uk.ac.ebi.picr.model.UPEntry.class);
+      }
+    }
+  }
+
+  public uk.ac.ebi.picr.model.UPEntry[] getUPIForAccession(
+          java.lang.String accession, java.lang.String ac_version,
+          java.lang.String[] searchDatabases, java.lang.String taxonId,
+          boolean onlyActive) throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[1]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("getUPIForAccession");
+    _call.setEncodingStyle(null);
+    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
+            Boolean.FALSE);
+    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
+            Boolean.FALSE);
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getUPIForAccession"));
+
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[] {
+        accession, ac_version, searchDatabases, taxonId,
+        new java.lang.Boolean(onlyActive) });
+
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (uk.ac.ebi.picr.model.UPEntry[]) _resp;
+      } catch (java.lang.Exception _exception)
+      {
+        return (uk.ac.ebi.picr.model.UPEntry[]) org.apache.axis.utils.JavaUtils
+                .convert(_resp, uk.ac.ebi.picr.model.UPEntry[].class);
+      }
+    }
+  }
+
+  public java.lang.String[] getMappedDatabaseNames()
+          throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[2]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("getMappedDatabaseNames");
+    _call.setEncodingStyle(null);
+    _call.setProperty(org.apache.axis.client.Call.SEND_TYPE_ATTR,
+            Boolean.FALSE);
+    _call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
+            Boolean.FALSE);
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName(
+            "http://www.ebi.ac.uk/picr/AccessionMappingService",
+            "getMappedDatabaseNames"));
+
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[] {});
+
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (java.lang.String[]) _resp;
+      } catch (java.lang.Exception _exception)
+      {
+        return (java.lang.String[]) org.apache.axis.utils.JavaUtils
+                .convert(_resp, java.lang.String[].class);
+      }
+    }
+  }
+
+}