X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fuk%2Fac%2Febi%2Fwww%2Fpicr%2FAccessionMappingService%2FAccessionMapperBindingStub.java;h=fa3fb80e4783f0a2471e64ac189f8bec5de037be;hb=HEAD;hp=dcdef37294231afc568606a42911e621ef0bb5d1;hpb=59d682209891099d46b960509907c79e3fb276fe;p=jalview.git
diff --git a/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java b/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
index dcdef37..fa3fb80 100644
--- a/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
+++ b/src/uk/ac/ebi/www/picr/AccessionMappingService/AccessionMapperBindingStub.java
@@ -1,19 +1,22 @@
/*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8)
- * Copyright (C) 2012 J Procter, AM Waterhouse, LM Lui, J Engelhardt, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
*
* This file is part of Jalview.
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
*/
package uk.ac.ebi.www.picr.AccessionMappingService;
@@ -45,28 +48,33 @@ public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
oper.addParameter(
new javax.xml.namespace.QName(
"http://www.ebi.ac.uk/picr/AccessionMappingService",
- "sequence"), new javax.xml.namespace.QName(
+ "sequence"),
+ new javax.xml.namespace.QName(
"http://www.w3.org/2001/XMLSchema", "string"),
java.lang.String.class,
org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.addParameter(new javax.xml.namespace.QName(
- "http://www.ebi.ac.uk/picr/AccessionMappingService",
- "searchDatabases"), new javax.xml.namespace.QName(
- "http://www.w3.org/2001/XMLSchema", "string"),
- java.lang.String[].class,
- org.apache.axis.description.ParameterDesc.IN, false, false);
oper.addParameter(
new javax.xml.namespace.QName(
"http://www.ebi.ac.uk/picr/AccessionMappingService",
- "taxonId"), new javax.xml.namespace.QName(
+ "searchDatabases"),
+ new javax.xml.namespace.QName(
"http://www.w3.org/2001/XMLSchema", "string"),
- java.lang.String.class,
+ java.lang.String[].class,
org.apache.axis.description.ParameterDesc.IN, false, false);
oper.addParameter(new javax.xml.namespace.QName(
- "http://www.ebi.ac.uk/picr/AccessionMappingService",
- "onlyActive"), new javax.xml.namespace.QName(
- "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
+ "http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"),
+ new javax.xml.namespace.QName(
+ "http://www.w3.org/2001/XMLSchema", "string"),
+ java.lang.String.class,
org.apache.axis.description.ParameterDesc.IN, false, false);
+ oper.addParameter(
+ new javax.xml.namespace.QName(
+ "http://www.ebi.ac.uk/picr/AccessionMappingService",
+ "onlyActive"),
+ new javax.xml.namespace.QName(
+ "http://www.w3.org/2001/XMLSchema", "boolean"),
+ boolean.class, org.apache.axis.description.ParameterDesc.IN,
+ false, false);
oper.setReturnType(new javax.xml.namespace.QName(
"http://model.picr.ebi.ac.uk", "UPEntry"));
oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry.class);
@@ -79,36 +87,44 @@ public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
oper = new org.apache.axis.description.OperationDesc();
oper.setName("getUPIForAccession");
- oper.addParameter(new javax.xml.namespace.QName(
- "http://www.ebi.ac.uk/picr/AccessionMappingService",
- "accession"), new javax.xml.namespace.QName(
- "http://www.w3.org/2001/XMLSchema", "string"),
+ oper.addParameter(
+ new javax.xml.namespace.QName(
+ "http://www.ebi.ac.uk/picr/AccessionMappingService",
+ "accession"),
+ new javax.xml.namespace.QName(
+ "http://www.w3.org/2001/XMLSchema", "string"),
java.lang.String.class,
org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.addParameter(new javax.xml.namespace.QName(
- "http://www.ebi.ac.uk/picr/AccessionMappingService",
- "ac_version"), new javax.xml.namespace.QName(
- "http://www.w3.org/2001/XMLSchema", "string"),
+ oper.addParameter(
+ new javax.xml.namespace.QName(
+ "http://www.ebi.ac.uk/picr/AccessionMappingService",
+ "ac_version"),
+ new javax.xml.namespace.QName(
+ "http://www.w3.org/2001/XMLSchema", "string"),
java.lang.String.class,
org.apache.axis.description.ParameterDesc.IN, false, false);
- oper.addParameter(new javax.xml.namespace.QName(
- "http://www.ebi.ac.uk/picr/AccessionMappingService",
- "searchDatabases"), new javax.xml.namespace.QName(
- "http://www.w3.org/2001/XMLSchema", "string"),
- java.lang.String[].class,
- org.apache.axis.description.ParameterDesc.IN, false, false);
oper.addParameter(
new javax.xml.namespace.QName(
"http://www.ebi.ac.uk/picr/AccessionMappingService",
- "taxonId"), new javax.xml.namespace.QName(
+ "searchDatabases"),
+ new javax.xml.namespace.QName(
"http://www.w3.org/2001/XMLSchema", "string"),
- java.lang.String.class,
+ java.lang.String[].class,
org.apache.axis.description.ParameterDesc.IN, false, false);
oper.addParameter(new javax.xml.namespace.QName(
- "http://www.ebi.ac.uk/picr/AccessionMappingService",
- "onlyActive"), new javax.xml.namespace.QName(
- "http://www.w3.org/2001/XMLSchema", "boolean"), boolean.class,
+ "http://www.ebi.ac.uk/picr/AccessionMappingService", "taxonId"),
+ new javax.xml.namespace.QName(
+ "http://www.w3.org/2001/XMLSchema", "string"),
+ java.lang.String.class,
org.apache.axis.description.ParameterDesc.IN, false, false);
+ oper.addParameter(
+ new javax.xml.namespace.QName(
+ "http://www.ebi.ac.uk/picr/AccessionMappingService",
+ "onlyActive"),
+ new javax.xml.namespace.QName(
+ "http://www.w3.org/2001/XMLSchema", "boolean"),
+ boolean.class, org.apache.axis.description.ParameterDesc.IN,
+ false, false);
oper.setReturnType(new javax.xml.namespace.QName(
"http://model.picr.ebi.ac.uk", "UPEntry"));
oper.setReturnClass(uk.ac.ebi.picr.model.UPEntry[].class);
@@ -273,7 +289,8 @@ public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
Boolean.FALSE);
_call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+ _call.setSOAPVersion(
+ org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
_call.setOperationName(new javax.xml.namespace.QName(
"http://www.ebi.ac.uk/picr/AccessionMappingService",
"getUPIForSequence"));
@@ -283,7 +300,7 @@ public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
java.lang.Object _resp = _call
.invoke(new java.lang.Object[]
{ sequence, searchDatabases, taxonId,
- new java.lang.Boolean(onlyActive) });
+ java.lang.Boolean.valueOf(onlyActive) });
if (_resp instanceof java.rmi.RemoteException)
{
@@ -321,16 +338,18 @@ public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
Boolean.FALSE);
_call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+ _call.setSOAPVersion(
+ org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
_call.setOperationName(new javax.xml.namespace.QName(
"http://www.ebi.ac.uk/picr/AccessionMappingService",
"getUPIForAccession"));
setRequestHeaders(_call);
setAttachments(_call);
- java.lang.Object _resp = _call.invoke(new java.lang.Object[]
- { accession, ac_version, searchDatabases, taxonId,
- new java.lang.Boolean(onlyActive) });
+ java.lang.Object _resp = _call
+ .invoke(new java.lang.Object[]
+ { accession, ac_version, searchDatabases, taxonId,
+ java.lang.Boolean.valueOf(onlyActive) });
if (_resp instanceof java.rmi.RemoteException)
{
@@ -366,15 +385,15 @@ public class AccessionMapperBindingStub extends org.apache.axis.client.Stub
Boolean.FALSE);
_call.setProperty(org.apache.axis.AxisEngine.PROP_DOMULTIREFS,
Boolean.FALSE);
- _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+ _call.setSOAPVersion(
+ org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
_call.setOperationName(new javax.xml.namespace.QName(
"http://www.ebi.ac.uk/picr/AccessionMappingService",
"getMappedDatabaseNames"));
setRequestHeaders(_call);
setAttachments(_call);
- java.lang.Object _resp = _call.invoke(new java.lang.Object[]
- {});
+ java.lang.Object _resp = _call.invoke(new java.lang.Object[] {});
if (_resp instanceof java.rmi.RemoteException)
{