X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fuk%2Fac%2Fvamsas%2Fclient%2Fsimpleclient%2FLockedFileOutputStream.java;h=47a66a75f08517e6de74e5240348a0f317ec8d22;hb=1eea4b639911330e7cd65e17c5421cc584f0d22e;hp=178c74d1bf5895ec8fbbaf2417dee89afbfb1326;hpb=5156a824b13ecd091af9f84870f41d83eb59bd71;p=vamsas.git

diff --git a/src/uk/ac/vamsas/client/simpleclient/LockedFileOutputStream.java b/src/uk/ac/vamsas/client/simpleclient/LockedFileOutputStream.java
index 178c74d..47a66a7 100644
--- a/src/uk/ac/vamsas/client/simpleclient/LockedFileOutputStream.java
+++ b/src/uk/ac/vamsas/client/simpleclient/LockedFileOutputStream.java
@@ -1,5 +1,23 @@
-/**
+/*
+ * This file is part of the Vamsas Client version 0.2. 
+ * Copyright 2010 by Jim Procter, Iain Milne, Pierre Marguerite, 
+ *  Andrew Waterhouse and Dominik Lindner.
+ * 
+ * Earlier versions have also been incorporated into Jalview version 2.4 
+ * since 2008, and TOPALi version 2 since 2007.
+ * 
+ * The Vamsas Client is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU Lesser General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *  
+ * The Vamsas Client is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU Lesser General Public License for more details.
  * 
+ * You should have received a copy of the GNU Lesser General Public License
+ * along with the Vamsas Client.  If not, see <http://www.gnu.org/licenses/>.
  */
 package uk.ac.vamsas.client.simpleclient;
 
@@ -15,22 +33,27 @@ import org.apache.commons.logging.LogFactory;
 
 /**
  * @author Jim
- *
+ * 
  */
 public class LockedFileOutputStream extends FileOutputStream {
-  private static org.apache.commons.logging.Log log = LogFactory.getLog(LockedFileOutputStream.class);
-  //FileOutputStream ostream=null;
-  boolean closed=true;
+  private static org.apache.commons.logging.Log log = LogFactory
+      .getLog(LockedFileOutputStream.class);
+
+  // FileOutputStream ostream=null;
+  boolean closed = true;
+
   private void init() {
     FileChannel ch = super.getChannel();
-    if (ch!=null) {
-      try { closed = !ch.isOpen();
+    if (ch != null) {
+      try {
+        closed = !ch.isOpen();
       } catch (Exception e) {
-        closed=true;
-        log.debug("Invalid LockedOutputStream marked closed.",e);
+        closed = true;
+        log.debug("Invalid LockedOutputStream marked closed.", e);
       }
     }
   }
+
   /**
    * @param file
    * @throws FileNotFoundException
@@ -58,7 +81,7 @@ public class LockedFileOutputStream extends FileOutputStream {
     super(fdObj);
     init();
     if (fdObj.valid())
-      closed=false;
+      closed = false;
   }
 
   /**
@@ -80,6 +103,7 @@ public class LockedFileOutputStream extends FileOutputStream {
     super(name, append);
     init();
   }
+
   /**
    * closes - actually just flushes the stream instead.
    */
@@ -90,10 +114,9 @@ public class LockedFileOutputStream extends FileOutputStream {
       log.debug("Marking Lockedoutputstream closed.");
     } else
       throw new IOException("Close on already closed FileOutputStream.");
-    closed=true;
+    closed = true;
   }
 
-
   /**
    * @throws IOException
    * @see java.io.OutputStream#flush()
@@ -116,8 +139,6 @@ public class LockedFileOutputStream extends FileOutputStream {
       return null;
   }
 
-
-
   /**
    * @param b
    * @param off
@@ -155,5 +176,5 @@ public class LockedFileOutputStream extends FileOutputStream {
     else
       throw new IOException("write on Closed FileOutputStream");
   }
-  
+
 }