Note: Just in case the collection contents - * are changing in another thread, we pass a 0-length Array of - * the correct type into the API call. This way we know - * that the Array returned is of exactly the correct length. - * - * @return this collection as an Array - */ - public java.lang.Object[] getTreeId( - ) { - java.lang.Object[] array = new java.lang.Object[0]; - return (java.lang.Object[]) this._treeId.toArray(array); - } - - /** - * Method getTreeIdAsReference.Returns a reference to - * '_treeId'. No type checking is performed on any - * modifications to the Vector. - * - * @return a reference to the Vector backing this class - */ - public java.util.Vector getTreeIdAsReference( - ) { - return this._treeId; - } - - /** - * Method getTreeIdCount. - * - * @return the size of this collection - */ - public int getTreeIdCount( - ) { - return this._treeId.size(); - } - - /** - * Overrides the java.lang.Object.hashCode method. - *
- * The following steps came from Effective Java Programming - * Language Guide by Joshua Bloch, Chapter 3 - * - * @return a hash code value for the object. - */ - public int hashCode( - ) { - int result = super.hashCode(); - - long tmp; - if (_treeId != null - && !org.castor.util.CycleBreaker.startingToCycle(_treeId)) { - result = 37 * result + _treeId.hashCode(); - org.castor.util.CycleBreaker.releaseCycleHandle(_treeId); - } - if (_nodespec != null - && !org.castor.util.CycleBreaker.startingToCycle(_nodespec)) { - result = 37 * result + _nodespec.hashCode(); - org.castor.util.CycleBreaker.releaseCycleHandle(_nodespec); - } - - return result; - } - - /** - * Method isValid. - * - * @return true if this object is valid according to the schema - */ - public boolean isValid( - ) { - try { - validate(); - } catch (org.exolab.castor.xml.ValidationException vex) { + if (this._nodespec != null) { + if (temp._nodespec == null) + return false; + if (this._nodespec != temp._nodespec) { + thcycle = org.castor.util.CycleBreaker + .startingToCycle(this._nodespec); + tmcycle = org.castor.util.CycleBreaker + .startingToCycle(temp._nodespec); + if (thcycle != tmcycle) { + if (!thcycle) { + org.castor.util.CycleBreaker.releaseCycleHandle(this._nodespec); + } + ; + if (!tmcycle) { + org.castor.util.CycleBreaker.releaseCycleHandle(temp._nodespec); + } + ; return false; + } + if (!thcycle) { + if (!this._nodespec.equals(temp._nodespec)) { + org.castor.util.CycleBreaker.releaseCycleHandle(this._nodespec); + org.castor.util.CycleBreaker.releaseCycleHandle(temp._nodespec); + return false; + } + org.castor.util.CycleBreaker.releaseCycleHandle(this._nodespec); + org.castor.util.CycleBreaker.releaseCycleHandle(temp._nodespec); + } } - return true; - } - - /** - * - * - * @param out - * @throws org.exolab.castor.xml.MarshalException if object is - * null or if any SAXException is thrown during marshaling - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - */ - public void marshal( - final java.io.Writer out) - throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { - Marshaller.marshal(this, out); - } - - /** - * - * - * @param handler - * @throws java.io.IOException if an IOException occurs during - * marshaling - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - * @throws org.exolab.castor.xml.MarshalException if object is - * null or if any SAXException is thrown during marshaling - */ - public void marshal( - final org.xml.sax.ContentHandler handler) - throws java.io.IOException, org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { - Marshaller.marshal(this, handler); - } - - /** - */ - public void removeAllTreeId( - ) { - this._treeId.clear(); + } else if (temp._nodespec != null) + return false; + return true; } - - /** - * Method removeTreeId. - * - * @param vTreeId - * @return true if the object was removed from the collection. - */ - public boolean removeTreeId( - final java.lang.Object vTreeId) { - boolean removed = _treeId.remove(vTreeId); - return removed; + return false; + } + + /** + * Returns the value of field 'nodespec'. The field 'nodespec' has the + * following description: String uniquely identifying a particular node in the + * referenced tree according to the format of the tree representation that is + * referenced. + * + * + * @return the value of field 'Nodespec'. + */ + public java.lang.String getNodespec() { + return this._nodespec; + } + + /** + * Method getTreeId. + * + * @param index + * @throws java.lang.IndexOutOfBoundsException + * if the index given is outside the bounds of the collection + * @return the value of the java.lang.Object at the given index + */ + public java.lang.Object getTreeId(final int index) + throws java.lang.IndexOutOfBoundsException { + // check bounds for index + if (index < 0 || index >= this._treeId.size()) { + throw new IndexOutOfBoundsException("getTreeId: Index value '" + index + + "' not in range [0.." + (this._treeId.size() - 1) + "]"); } - /** - * Method removeTreeIdAt. - * - * @param index - * @return the element removed from the collection - */ - public java.lang.Object removeTreeIdAt( - final int index) { - java.lang.Object obj = this._treeId.remove(index); - return obj; + return _treeId.get(index); + } + + /** + * Method getTreeId.Returns the contents of the collection in an Array. + *
+ * Note: Just in case the collection contents are changing in another thread, + * we pass a 0-length Array of the correct type into the API call. This way we + * know that the Array returned is of exactly the correct length. + * + * @return this collection as an Array + */ + public java.lang.Object[] getTreeId() { + java.lang.Object[] array = new java.lang.Object[0]; + return (java.lang.Object[]) this._treeId.toArray(array); + } + + /** + * Method getTreeIdAsReference.Returns a reference to '_treeId'. No type + * checking is performed on any modifications to the Vector. + * + * @return a reference to the Vector backing this class + */ + public java.util.Vector getTreeIdAsReference() { + return this._treeId; + } + + /** + * Method getTreeIdCount. + * + * @return the size of this collection + */ + public int getTreeIdCount() { + return this._treeId.size(); + } + + /** + * Overrides the java.lang.Object.hashCode method. + *
+ * The following steps came from Effective Java Programming Language + * Guide by Joshua Bloch, Chapter 3 + * + * @return a hash code value for the object. + */ + public int hashCode() { + int result = super.hashCode(); + + long tmp; + if (_treeId != null + && !org.castor.util.CycleBreaker.startingToCycle(_treeId)) { + result = 37 * result + _treeId.hashCode(); + org.castor.util.CycleBreaker.releaseCycleHandle(_treeId); } - - /** - * Sets the value of field 'nodespec'. The field 'nodespec' has - * the following description: String uniquely identifying a - * particular - * node in the referenced tree according to the format of - * the tree representation that is referenced. - * - * - * @param nodespec the value of field 'nodespec'. - */ - public void setNodespec( - final java.lang.String nodespec) { - this._nodespec = nodespec; + if (_nodespec != null + && !org.castor.util.CycleBreaker.startingToCycle(_nodespec)) { + result = 37 * result + _nodespec.hashCode(); + org.castor.util.CycleBreaker.releaseCycleHandle(_nodespec); } - /** - * - * - * @param index - * @param vTreeId - * @throws java.lang.IndexOutOfBoundsException if the index - * given is outside the bounds of the collection - */ - public void setTreeId( - final int index, - final java.lang.Object vTreeId) - throws java.lang.IndexOutOfBoundsException { - // check bounds for index - if (index < 0 || index >= this._treeId.size()) { - throw new IndexOutOfBoundsException("setTreeId: Index value '" + index + "' not in range [0.." + (this._treeId.size() - 1) + "]"); - } - - this._treeId.set(index, vTreeId); + return result; + } + + /** + * Method isValid. + * + * @return true if this object is valid according to the schema + */ + public boolean isValid() { + try { + validate(); + } catch (org.exolab.castor.xml.ValidationException vex) { + return false; } - - /** - * - * - * @param vTreeIdArray + return true; + } + + /** + * + * + * @param out + * @throws org.exolab.castor.xml.MarshalException + * if object is null or if any SAXException is thrown during + * marshaling + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + */ + public void marshal(final java.io.Writer out) + throws org.exolab.castor.xml.MarshalException, + org.exolab.castor.xml.ValidationException { + Marshaller.marshal(this, out); + } + + /** + * + * + * @param handler + * @throws java.io.IOException + * if an IOException occurs during marshaling + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + * @throws org.exolab.castor.xml.MarshalException + * if object is null or if any SAXException is thrown during + * marshaling + */ + public void marshal(final org.xml.sax.ContentHandler handler) + throws java.io.IOException, org.exolab.castor.xml.MarshalException, + org.exolab.castor.xml.ValidationException { + Marshaller.marshal(this, handler); + } + + /** */ - public void setTreeId( - final java.lang.Object[] vTreeIdArray) { - //-- copy array - _treeId.clear(); - - for (int i = 0; i < vTreeIdArray.length; i++) { - this._treeId.add(vTreeIdArray[i]); - } + public void removeAllTreeId() { + this._treeId.clear(); + } + + /** + * Method removeTreeId. + * + * @param vTreeId + * @return true if the object was removed from the collection. + */ + public boolean removeTreeId(final java.lang.Object vTreeId) { + boolean removed = _treeId.remove(vTreeId); + return removed; + } + + /** + * Method removeTreeIdAt. + * + * @param index + * @return the element removed from the collection + */ + public java.lang.Object removeTreeIdAt(final int index) { + java.lang.Object obj = this._treeId.remove(index); + return obj; + } + + /** + * Sets the value of field 'nodespec'. The field 'nodespec' has the following + * description: String uniquely identifying a particular node in the + * referenced tree according to the format of the tree representation that is + * referenced. + * + * + * @param nodespec + * the value of field 'nodespec'. + */ + public void setNodespec(final java.lang.String nodespec) { + this._nodespec = nodespec; + } + + /** + * + * + * @param index + * @param vTreeId + * @throws java.lang.IndexOutOfBoundsException + * if the index given is outside the bounds of the collection + */ + public void setTreeId(final int index, final java.lang.Object vTreeId) + throws java.lang.IndexOutOfBoundsException { + // check bounds for index + if (index < 0 || index >= this._treeId.size()) { + throw new IndexOutOfBoundsException("setTreeId: Index value '" + index + + "' not in range [0.." + (this._treeId.size() - 1) + "]"); } - /** - * Sets the value of '_treeId' by copying the given Vector. All - * elements will be checked for type safety. - * - * @param vTreeIdList the Vector to copy. - */ - public void setTreeId( - final java.util.Vector vTreeIdList) { - // copy vector - this._treeId.clear(); - - this._treeId.addAll(vTreeIdList); - } + this._treeId.set(index, vTreeId); + } - /** - * Sets the value of '_treeId' by setting it to the given - * Vector. No type checking is performed. - * @deprecated - * - * @param treeIdVector the Vector to set. - */ - public void setTreeIdAsReference( - final java.util.Vector treeIdVector) { - this._treeId = treeIdVector; - } + /** + * + * + * @param vTreeIdArray + */ + public void setTreeId(final java.lang.Object[] vTreeIdArray) { + // -- copy array + _treeId.clear(); - /** - * Method unmarshal. - * - * @param reader - * @throws org.exolab.castor.xml.MarshalException if object is - * null or if any SAXException is thrown during marshaling - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - * @return the unmarshaled uk.ac.vamsas.objects.core.NodeType - */ - public static uk.ac.vamsas.objects.core.NodeType unmarshal( - final java.io.Reader reader) - throws org.exolab.castor.xml.MarshalException, org.exolab.castor.xml.ValidationException { - return (uk.ac.vamsas.objects.core.NodeType) Unmarshaller.unmarshal(uk.ac.vamsas.objects.core.Treenode.class, reader); - } - - /** - * - * - * @throws org.exolab.castor.xml.ValidationException if this - * object is an invalid instance according to the schema - */ - public void validate( - ) - throws org.exolab.castor.xml.ValidationException { - org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); - validator.validate(this); + for (int i = 0; i < vTreeIdArray.length; i++) { + this._treeId.add(vTreeIdArray[i]); } + } + + /** + * Sets the value of '_treeId' by copying the given Vector. All elements will + * be checked for type safety. + * + * @param vTreeIdList + * the Vector to copy. + */ + public void setTreeId(final java.util.Vector vTreeIdList) { + // copy vector + this._treeId.clear(); + + this._treeId.addAll(vTreeIdList); + } + + /** + * Sets the value of '_treeId' by setting it to the given Vector. No type + * checking is performed. + * + * @deprecated + * + * @param treeIdVector + * the Vector to set. + */ + public void setTreeIdAsReference(final java.util.Vector treeIdVector) { + this._treeId = treeIdVector; + } + + /** + * Method unmarshal. + * + * @param reader + * @throws org.exolab.castor.xml.MarshalException + * if object is null or if any SAXException is thrown during + * marshaling + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + * @return the unmarshaled uk.ac.vamsas.objects.core.NodeType + */ + public static uk.ac.vamsas.objects.core.NodeType unmarshal( + final java.io.Reader reader) + throws org.exolab.castor.xml.MarshalException, + org.exolab.castor.xml.ValidationException { + return (uk.ac.vamsas.objects.core.NodeType) Unmarshaller.unmarshal( + uk.ac.vamsas.objects.core.Treenode.class, reader); + } + + /** + * + * + * @throws org.exolab.castor.xml.ValidationException + * if this object is an invalid instance according to the schema + */ + public void validate() throws org.exolab.castor.xml.ValidationException { + org.exolab.castor.xml.Validator validator = new org.exolab.castor.xml.Validator(); + validator.validate(this); + } }