X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fuk%2Fac%2Fvamsas%2Fobjects%2Futils%2FGlyphDictionary.java;h=7a01488c6e929e7497c96717106077f6e4a1964b;hb=HEAD;hp=a49f4be2c06a5ba6a5e269697fc139b480c128b7;hpb=a9e0b2497cae20cee8ec0d8c66d51e0d819b8581;p=vamsas.git

diff --git a/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java b/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java
index a49f4be..7a01488 100644
--- a/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java
+++ b/src/uk/ac/vamsas/objects/utils/GlyphDictionary.java
@@ -1,23 +1,47 @@
+/*
+ * This file is part of the Vamsas Client version 0.2. 
+ * Copyright 2010 by Jim Procter, Iain Milne, Pierre Marguerite, 
+ *  Andrew Waterhouse and Dominik Lindner.
+ * 
+ * Earlier versions have also been incorporated into Jalview version 2.4 
+ * since 2008, and TOPALi version 2 since 2007.
+ * 
+ * The Vamsas Client is free software: you can redistribute it and/or modify
+ * it under the terms of the GNU Lesser General Public License as published by
+ * the Free Software Foundation, either version 3 of the License, or
+ * (at your option) any later version.
+ *  
+ * The Vamsas Client is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+ * GNU Lesser General Public License for more details.
+ * 
+ * You should have received a copy of the GNU Lesser General Public License
+ * along with the Vamsas Client.  If not, see <http://www.gnu.org/licenses/>.
+ */
 package uk.ac.vamsas.objects.utils;
 
 /**
- * dict attribute values for glyph symbol sets found in uk.ac.vamsas.objects.core.AnnotationElement
- * TODO: add validators and multilength symbols.
+ * dict attribute values for glyph symbol sets found in
+ * uk.ac.vamsas.objects.core.AnnotationElement TODO: add validators and
+ * multilength symbols.
+ * 
  * @author JimP
- *
+ * 
  */
 public class GlyphDictionary {
   /**
    * standard H, E, or C three state secondary structure assignment.
    */
-  static final public String PROTEIN_SS_3STATE="aasecstr_3"; // HE, blank or C
+  static final public String PROTEIN_SS_3STATE = "aasecstr_3"; // HE, blank or C
+
   /**
    * default glyph type attribute indicates a UTF8 character
    */
-  static final public String DEFAULT="utf8";
+  static final public String DEFAULT = "utf8";
+
   /**
-   * kyte and doolittle hydrophobicity
-   * TODO: specify this glyph set.
+   * kyte and doolittle hydrophobicity TODO: specify this glyph set.
    */
-  static final public String PROTEIN_HD_HYDRO="kd_hydrophobicity";
+  static final public String PROTEIN_HD_HYDRO = "kd_hydrophobicity";
 }