X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fvamsas%2Fobjects%2Fsimple%2FAlignment_Helper.java;h=0c9e127b5e395f5d44bcc424ae8a093e78498063;hb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;hp=1425a5a20b75a9ac503b9b10d8e5c89952d2eaac;hpb=357598ffdf5c04f08a2a370218f0e22551ee9231;p=jalview.git

diff --git a/src/vamsas/objects/simple/Alignment_Helper.java b/src/vamsas/objects/simple/Alignment_Helper.java
index 1425a5a..0c9e127 100755
--- a/src/vamsas/objects/simple/Alignment_Helper.java
+++ b/src/vamsas/objects/simple/Alignment_Helper.java
@@ -1,70 +1,81 @@
-/**
- * Alignment_Helper.java
- *
- * This file was auto-generated from WSDL
- * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.8.1)
+ * Copyright (C) 2014 The Jalview Authors
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
-
 package vamsas.objects.simple;
 
-public class Alignment_Helper {
-    // Type metadata
-    private static org.apache.axis.description.TypeDesc typeDesc =
-        new org.apache.axis.description.TypeDesc(Alignment.class, true);
+public class Alignment_Helper
+{
+  // Type metadata
+  private static org.apache.axis.description.TypeDesc typeDesc = new org.apache.axis.description.TypeDesc(
+          Alignment.class, true);
 
-    static {
-        typeDesc.setXmlType(new javax.xml.namespace.QName("simple.objects.vamsas", "Alignment"));
-        org.apache.axis.description.ElementDesc elemField = new org.apache.axis.description.ElementDesc();
-        elemField.setFieldName("gapchar");
-        elemField.setXmlName(new javax.xml.namespace.QName("", "gapchar"));
-        elemField.setXmlType(new javax.xml.namespace.QName("http://schemas.xmlsoap.org/soap/encoding/", "string"));
-        typeDesc.addFieldDesc(elemField);
-        elemField = new org.apache.axis.description.ElementDesc();
-        elemField.setFieldName("method");
-        elemField.setXmlName(new javax.xml.namespace.QName("", "method"));
-        elemField.setXmlType(new javax.xml.namespace.QName("http://schemas.xmlsoap.org/soap/encoding/", "string"));
-        typeDesc.addFieldDesc(elemField);
-        elemField = new org.apache.axis.description.ElementDesc();
-        elemField.setFieldName("seqs");
-        elemField.setXmlName(new javax.xml.namespace.QName("", "seqs"));
-        elemField.setXmlType(new javax.xml.namespace.QName("simple.objects.vamsas", "SequenceSet"));
-        typeDesc.addFieldDesc(elemField);
-        elemField = new org.apache.axis.description.ElementDesc();
-        elemField.setFieldName("seqsAsArray");
-        elemField.setXmlName(new javax.xml.namespace.QName("", "seqsAsArray"));
-        elemField.setXmlType(new javax.xml.namespace.QName("simple.objects.vamsas", "Sequence"));
-        typeDesc.addFieldDesc(elemField);
-    }
+  static
+  {
+    typeDesc.setXmlType(new javax.xml.namespace.QName(
+            "simple.objects.vamsas", "Alignment"));
+    org.apache.axis.description.ElementDesc elemField = new org.apache.axis.description.ElementDesc();
+    elemField.setFieldName("gapchar");
+    elemField.setXmlName(new javax.xml.namespace.QName("", "gapchar"));
+    elemField.setXmlType(new javax.xml.namespace.QName(
+            "http://schemas.xmlsoap.org/soap/encoding/", "string"));
+    typeDesc.addFieldDesc(elemField);
+    elemField = new org.apache.axis.description.ElementDesc();
+    elemField.setFieldName("method");
+    elemField.setXmlName(new javax.xml.namespace.QName("", "method"));
+    elemField.setXmlType(new javax.xml.namespace.QName(
+            "http://schemas.xmlsoap.org/soap/encoding/", "string"));
+    typeDesc.addFieldDesc(elemField);
+    elemField = new org.apache.axis.description.ElementDesc();
+    elemField.setFieldName("seqs");
+    elemField.setXmlName(new javax.xml.namespace.QName("", "seqs"));
+    elemField.setXmlType(new javax.xml.namespace.QName(
+            "simple.objects.vamsas", "SequenceSet"));
+    typeDesc.addFieldDesc(elemField);
+  }
 
-    /**
-     * Return type metadata object
-     */
-    public static org.apache.axis.description.TypeDesc getTypeDesc() {
-        return typeDesc;
-    }
+  /**
+   * Return type metadata object
+   */
+  public static org.apache.axis.description.TypeDesc getTypeDesc()
+  {
+    return typeDesc;
+  }
 
-    /**
-     * Get Custom Serializer
-     */
-    public static org.apache.axis.encoding.Serializer getSerializer(
-           java.lang.String mechType, 
-           java.lang.Class _javaType,  
-           javax.xml.namespace.QName _xmlType) {
-        return 
-          new  org.apache.axis.encoding.ser.BeanSerializer(
-            _javaType, _xmlType, typeDesc);
-    }
+  /**
+   * Get Custom Serializer
+   */
+  public static org.apache.axis.encoding.Serializer getSerializer(
+          java.lang.String mechType, java.lang.Class _javaType,
+          javax.xml.namespace.QName _xmlType)
+  {
+    return new org.apache.axis.encoding.ser.BeanSerializer(_javaType,
+            _xmlType, typeDesc);
+  }
 
-    /**
-     * Get Custom Deserializer
-     */
-    public static org.apache.axis.encoding.Deserializer getDeserializer(
-           java.lang.String mechType, 
-           java.lang.Class _javaType,  
-           javax.xml.namespace.QName _xmlType) {
-        return 
-          new  org.apache.axis.encoding.ser.BeanDeserializer(
-            _javaType, _xmlType, typeDesc);
-    }
+  /**
+   * Get Custom Deserializer
+   */
+  public static org.apache.axis.encoding.Deserializer getDeserializer(
+          java.lang.String mechType, java.lang.Class _javaType,
+          javax.xml.namespace.QName _xmlType)
+  {
+    return new org.apache.axis.encoding.ser.BeanDeserializer(_javaType,
+            _xmlType, typeDesc);
+  }
 
 }