X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fvamsas%2Fobjects%2Fsimple%2FSeqSearchResult.java;h=71084c08b61ea6a92f1da49df365ea02bbb983b5;hb=a45774ee31d9f35d4eff46d54d7deab719afb092;hp=4d75aad9f2be2ca03f33d0c2aa610cb7ba4669d3;hpb=08bde8d252a69d4d6a3b2497f759bd5d6f154a3f;p=jalview.git

diff --git a/src/vamsas/objects/simple/SeqSearchResult.java b/src/vamsas/objects/simple/SeqSearchResult.java
index 4d75aad..71084c0 100644
--- a/src/vamsas/objects/simple/SeqSearchResult.java
+++ b/src/vamsas/objects/simple/SeqSearchResult.java
@@ -1,161 +1,185 @@
-/**
- * SeqSearchResult.java
- *
- * This file was auto-generated from WSDL
- * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
+/*
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * 
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
  */
-
 package vamsas.objects.simple;
 
-public class SeqSearchResult  extends vamsas.objects.simple.Result  implements java.io.Serializable {
-    private vamsas.objects.simple.Alignment alignment;
-    private java.lang.String annotation;
-    private java.lang.String features;
-    private java.lang.String newickTree;
-
-    public SeqSearchResult() {
+public class SeqSearchResult extends vamsas.objects.simple.Result implements
+        java.io.Serializable
+{
+  private vamsas.objects.simple.Alignment alignment;
+
+  private java.lang.String annotation;
+
+  private java.lang.String features;
+
+  private java.lang.String newickTree;
+
+  public SeqSearchResult()
+  {
+  }
+
+  public SeqSearchResult(vamsas.objects.simple.Alignment alignment,
+          java.lang.String annotation, java.lang.String features,
+          java.lang.String newickTree)
+  {
+    this.alignment = alignment;
+    this.annotation = annotation;
+    this.features = features;
+    this.newickTree = newickTree;
+  }
+
+  /**
+   * Gets the alignment value for this SeqSearchResult.
+   * 
+   * @return alignment
+   */
+  public vamsas.objects.simple.Alignment getAlignment()
+  {
+    return alignment;
+  }
+
+  /**
+   * Sets the alignment value for this SeqSearchResult.
+   * 
+   * @param alignment
+   */
+  public void setAlignment(vamsas.objects.simple.Alignment alignment)
+  {
+    this.alignment = alignment;
+  }
+
+  /**
+   * Gets the annotation value for this SeqSearchResult.
+   * 
+   * @return annotation
+   */
+  public java.lang.String getAnnotation()
+  {
+    return annotation;
+  }
+
+  /**
+   * Sets the annotation value for this SeqSearchResult.
+   * 
+   * @param annotation
+   */
+  public void setAnnotation(java.lang.String annotation)
+  {
+    this.annotation = annotation;
+  }
+
+  /**
+   * Gets the features value for this SeqSearchResult.
+   * 
+   * @return features
+   */
+  public java.lang.String getFeatures()
+  {
+    return features;
+  }
+
+  /**
+   * Sets the features value for this SeqSearchResult.
+   * 
+   * @param features
+   */
+  public void setFeatures(java.lang.String features)
+  {
+    this.features = features;
+  }
+
+  /**
+   * Gets the newickTree value for this SeqSearchResult.
+   * 
+   * @return newickTree
+   */
+  public java.lang.String getNewickTree()
+  {
+    return newickTree;
+  }
+
+  /**
+   * Sets the newickTree value for this SeqSearchResult.
+   * 
+   * @param newickTree
+   */
+  public void setNewickTree(java.lang.String newickTree)
+  {
+    this.newickTree = newickTree;
+  }
+
+  private java.lang.Object __equalsCalc = null;
+
+  public synchronized boolean equals(java.lang.Object obj)
+  {
+    if (!(obj instanceof SeqSearchResult))
+      return false;
+    SeqSearchResult other = (SeqSearchResult) obj;
+    if (obj == null)
+      return false;
+    if (this == obj)
+      return true;
+    if (__equalsCalc != null)
+    {
+      return (__equalsCalc == obj);
     }
-
-    public SeqSearchResult(
-           vamsas.objects.simple.Alignment alignment,
-           java.lang.String annotation,
-           java.lang.String features,
-           java.lang.String newickTree) {
-           this.alignment = alignment;
-           this.annotation = annotation;
-           this.features = features;
-           this.newickTree = newickTree;
+    __equalsCalc = obj;
+    boolean _equals;
+    _equals = super.equals(obj)
+            && ((this.alignment == null && other.getAlignment() == null) || (this.alignment != null && this.alignment
+                    .equals(other.getAlignment())))
+            && ((this.annotation == null && other.getAnnotation() == null) || (this.annotation != null && this.annotation
+                    .equals(other.getAnnotation())))
+            && ((this.features == null && other.getFeatures() == null) || (this.features != null && this.features
+                    .equals(other.getFeatures())))
+            && ((this.newickTree == null && other.getNewickTree() == null) || (this.newickTree != null && this.newickTree
+                    .equals(other.getNewickTree())));
+    __equalsCalc = null;
+    return _equals;
+  }
+
+  private boolean __hashCodeCalc = false;
+
+  public synchronized int hashCode()
+  {
+    if (__hashCodeCalc)
+    {
+      return 0;
     }
-
-
-    /**
-     * Gets the alignment value for this SeqSearchResult.
-     * 
-     * @return alignment
-     */
-    public vamsas.objects.simple.Alignment getAlignment() {
-        return alignment;
-    }
-
-
-    /**
-     * Sets the alignment value for this SeqSearchResult.
-     * 
-     * @param alignment
-     */
-    public void setAlignment(vamsas.objects.simple.Alignment alignment) {
-        this.alignment = alignment;
+    __hashCodeCalc = true;
+    int _hashCode = super.hashCode();
+    if (getAlignment() != null)
+    {
+      _hashCode += getAlignment().hashCode();
     }
-
-
-    /**
-     * Gets the annotation value for this SeqSearchResult.
-     * 
-     * @return annotation
-     */
-    public java.lang.String getAnnotation() {
-        return annotation;
+    if (getAnnotation() != null)
+    {
+      _hashCode += getAnnotation().hashCode();
     }
-
-
-    /**
-     * Sets the annotation value for this SeqSearchResult.
-     * 
-     * @param annotation
-     */
-    public void setAnnotation(java.lang.String annotation) {
-        this.annotation = annotation;
+    if (getFeatures() != null)
+    {
+      _hashCode += getFeatures().hashCode();
     }
-
-
-    /**
-     * Gets the features value for this SeqSearchResult.
-     * 
-     * @return features
-     */
-    public java.lang.String getFeatures() {
-        return features;
-    }
-
-
-    /**
-     * Sets the features value for this SeqSearchResult.
-     * 
-     * @param features
-     */
-    public void setFeatures(java.lang.String features) {
-        this.features = features;
-    }
-
-
-    /**
-     * Gets the newickTree value for this SeqSearchResult.
-     * 
-     * @return newickTree
-     */
-    public java.lang.String getNewickTree() {
-        return newickTree;
-    }
-
-
-    /**
-     * Sets the newickTree value for this SeqSearchResult.
-     * 
-     * @param newickTree
-     */
-    public void setNewickTree(java.lang.String newickTree) {
-        this.newickTree = newickTree;
-    }
-
-    private java.lang.Object __equalsCalc = null;
-    public synchronized boolean equals(java.lang.Object obj) {
-        if (!(obj instanceof SeqSearchResult)) return false;
-        SeqSearchResult other = (SeqSearchResult) obj;
-        if (obj == null) return false;
-        if (this == obj) return true;
-        if (__equalsCalc != null) {
-            return (__equalsCalc == obj);
-        }
-        __equalsCalc = obj;
-        boolean _equals;
-        _equals = super.equals(obj) && 
-            ((this.alignment==null && other.getAlignment()==null) || 
-             (this.alignment!=null &&
-              this.alignment.equals(other.getAlignment()))) &&
-            ((this.annotation==null && other.getAnnotation()==null) || 
-             (this.annotation!=null &&
-              this.annotation.equals(other.getAnnotation()))) &&
-            ((this.features==null && other.getFeatures()==null) || 
-             (this.features!=null &&
-              this.features.equals(other.getFeatures()))) &&
-            ((this.newickTree==null && other.getNewickTree()==null) || 
-             (this.newickTree!=null &&
-              this.newickTree.equals(other.getNewickTree())));
-        __equalsCalc = null;
-        return _equals;
-    }
-
-    private boolean __hashCodeCalc = false;
-    public synchronized int hashCode() {
-        if (__hashCodeCalc) {
-            return 0;
-        }
-        __hashCodeCalc = true;
-        int _hashCode = super.hashCode();
-        if (getAlignment() != null) {
-            _hashCode += getAlignment().hashCode();
-        }
-        if (getAnnotation() != null) {
-            _hashCode += getAnnotation().hashCode();
-        }
-        if (getFeatures() != null) {
-            _hashCode += getFeatures().hashCode();
-        }
-        if (getNewickTree() != null) {
-            _hashCode += getNewickTree().hashCode();
-        }
-        __hashCodeCalc = false;
-        return _hashCode;
+    if (getNewickTree() != null)
+    {
+      _hashCode += getNewickTree().hashCode();
     }
+    __hashCodeCalc = false;
+    return _hashCode;
+  }
 
 }