X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fvamsas%2Fobjects%2Fsimple%2FSequenceSet.java;h=03b4f7e82435453be9d5a27d6ee2f7077da37ba5;hb=fc7dac25fd7a4eac42083e9aa94d1e752cabbe8b;hp=d8416b8a4a703b8662c14b90449159ddc85390a9;hpb=506d60f0e188723ddc91c26824b41ac7034df3fe;p=jalview.git

diff --git a/src/vamsas/objects/simple/SequenceSet.java b/src/vamsas/objects/simple/SequenceSet.java
index d8416b8..03b4f7e 100755
--- a/src/vamsas/objects/simple/SequenceSet.java
+++ b/src/vamsas/objects/simple/SequenceSet.java
@@ -1,20 +1,22 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.4)
- * Copyright (C) 2008 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
- * This program is free software; you can redistribute it and/or
- * modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation; either version 2
- * of the License, or (at your option) any later version.
+ * This file is part of Jalview.
  * 
- * This program is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
- * GNU General Public License for more details.
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
+ *  
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
  * 
  * You should have received a copy of the GNU General Public License
- * along with this program; if not, write to the Free Software
- * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+ * along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
  */
 package vamsas.objects.simple;
 
@@ -53,29 +55,38 @@ public class SequenceSet implements java.io.Serializable
 
   private java.lang.Object __equalsCalc = null;
 
+  @Override
   public synchronized boolean equals(java.lang.Object obj)
   {
+    if (obj == null)
+    {
+      return false;
+    }
     if (!(obj instanceof SequenceSet))
+    {
       return false;
+    }
     SequenceSet other = (SequenceSet) obj;
-    if (obj == null)
-      return false;
     if (this == obj)
+    {
       return true;
+    }
     if (__equalsCalc != null)
     {
       return (__equalsCalc == obj);
     }
     __equalsCalc = obj;
     boolean _equals;
-    _equals = true && ((this.seqs == null && other.getSeqs() == null) || (this.seqs != null && java.util.Arrays
-            .equals(this.seqs, other.getSeqs())));
+    _equals = true && ((this.seqs == null && other.getSeqs() == null)
+            || (this.seqs != null && java.util.Arrays.equals(this.seqs,
+                    other.getSeqs())));
     __equalsCalc = null;
     return _equals;
   }
 
   private boolean __hashCodeCalc = false;
 
+  @Override
   public synchronized int hashCode()
   {
     if (__hashCodeCalc)