X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fvamsas%2Fobjects%2Fsimple%2FSequenceSet.java;h=afecdb97448ad6a4ec0a8c2cac60fa75fd4e41ca;hb=783520af519c958e10a2af29f1d4242e1ab890a3;hp=62e58b42df917c1b758b6a5b250d4f65a91ed54d;hpb=357598ffdf5c04f08a2a370218f0e22551ee9231;p=jalview.git

diff --git a/src/vamsas/objects/simple/SequenceSet.java b/src/vamsas/objects/simple/SequenceSet.java
index 62e58b4..afecdb9 100755
--- a/src/vamsas/objects/simple/SequenceSet.java
+++ b/src/vamsas/objects/simple/SequenceSet.java
@@ -3,80 +3,111 @@
  *
  * This file was auto-generated from WSDL
  * by the Apache Axis 1.2RC2 Nov 16, 2004 (12:19:44 EST) WSDL2Java emitter.
- */
-
-package vamsas.objects.simple;
-
-public class SequenceSet  implements java.io.Serializable {
-    private vamsas.objects.simple.Sequence[] seqs;
-
-    public SequenceSet() {
-    }
-
-    public SequenceSet(
-           vamsas.objects.simple.Sequence[] seqs) {
-           this.seqs = seqs;
-    }
-
-
+ */
+
+/*
+* Jalview - A Sequence Alignment Editor and Viewer
+* Copyright (C) 2005 AM Waterhouse, J Procter, G Barton, M Clamp, S Searle
+*
+* This program is free software; you can redistribute it and/or
+* modify it under the terms of the GNU General Public License
+* as published by the Free Software Foundation; either version 2
+* of the License, or (at your option) any later version.
+*
+* This program is distributed in the hope that it will be useful,
+* but WITHOUT ANY WARRANTY; without even the implied warranty of
+* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+* GNU General Public License for more details.
+*
+* You should have received a copy of the GNU General Public License
+* along with this program; if not, write to the Free Software
+* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA
+*/
+package vamsas.objects.simple;
+
+public class SequenceSet implements java.io.Serializable {
+    private vamsas.objects.simple.Sequence[] seqs;
+    private java.lang.Object __equalsCalc = null;
+    private boolean __hashCodeCalc = false;
+
+    public SequenceSet() {
+    }
+
+    public SequenceSet(vamsas.objects.simple.Sequence[] seqs) {
+        this.seqs = seqs;
+    }
+
     /**
-     * Gets the seqs value for this SequenceSet.
-     * 
-     * @return seqs
-     */
-    public vamsas.objects.simple.Sequence[] getSeqs() {
-        return seqs;
-    }
-
-
+ * Gets the seqs value for this SequenceSet.
+ *
+ * @return seqs
+ */
+    public vamsas.objects.simple.Sequence[] getSeqs() {
+        return seqs;
+    }
+
     /**
-     * Sets the seqs value for this SequenceSet.
-     * 
-     * @param seqs
-     */
-    public void setSeqs(vamsas.objects.simple.Sequence[] seqs) {
-        this.seqs = seqs;
-    }
-
-    private java.lang.Object __equalsCalc = null;
-    public synchronized boolean equals(java.lang.Object obj) {
-        if (!(obj instanceof SequenceSet)) return false;
-        SequenceSet other = (SequenceSet) obj;
-        if (obj == null) return false;
-        if (this == obj) return true;
-        if (__equalsCalc != null) {
-            return (__equalsCalc == obj);
-        }
-        __equalsCalc = obj;
-        boolean _equals;
-        _equals = true && 
-            ((this.seqs==null && other.getSeqs()==null) || 
-             (this.seqs!=null &&
-              java.util.Arrays.equals(this.seqs, other.getSeqs())));
-        __equalsCalc = null;
-        return _equals;
-    }
-
-    private boolean __hashCodeCalc = false;
-    public synchronized int hashCode() {
-        if (__hashCodeCalc) {
-            return 0;
-        }
-        __hashCodeCalc = true;
-        int _hashCode = 1;
-        if (getSeqs() != null) {
-            for (int i=0;
-                 i<java.lang.reflect.Array.getLength(getSeqs());
-                 i++) {
-                java.lang.Object obj = java.lang.reflect.Array.get(getSeqs(), i);
-                if (obj != null &&
-                    !obj.getClass().isArray()) {
-                    _hashCode += obj.hashCode();
-                }
-            }
-        }
-        __hashCodeCalc = false;
-        return _hashCode;
-    }
-
-}
+ * Sets the seqs value for this SequenceSet.
+ *
+ * @param seqs
+ */
+    public void setSeqs(vamsas.objects.simple.Sequence[] seqs) {
+        this.seqs = seqs;
+    }
+
+    public synchronized boolean equals(java.lang.Object obj) {
+        if (!(obj instanceof SequenceSet)) {
+            return false;
+        }
+
+        SequenceSet other = (SequenceSet) obj;
+
+        if (obj == null) {
+            return false;
+        }
+
+        if (this == obj) {
+            return true;
+        }
+
+        if (__equalsCalc != null) {
+            return (__equalsCalc == obj);
+        }
+
+        __equalsCalc = obj;
+
+        boolean _equals;
+        _equals = true &&
+            (((this.seqs == null) && (other.getSeqs() == null)) ||
+            ((this.seqs != null) &&
+            java.util.Arrays.equals(this.seqs, other.getSeqs())));
+        __equalsCalc = null;
+
+        return _equals;
+    }
+
+    public synchronized int hashCode() {
+        if (__hashCodeCalc) {
+            return 0;
+        }
+
+        __hashCodeCalc = true;
+
+        int _hashCode = 1;
+
+        if (getSeqs() != null) {
+            for (int i = 0; i < java.lang.reflect.Array.getLength(getSeqs());
+                    i++) {
+                java.lang.Object obj = java.lang.reflect.Array.get(getSeqs(), i);
+
+                if ((obj != null) && !obj.getClass().isArray()) {
+                    _hashCode += obj.hashCode();
+                }
+            }
+        }
+
+        __hashCodeCalc = false;
+
+        return _hashCode;
+    }
+}