X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2FMCview%2FPDBfileTest.java;h=3e24f520922aad6c59e1c7f055c5916d7ba7f1e8;hb=23278fe32b704fa2d246d34ac17699e9555d00ee;hp=1dfeba9826eda7117336eacf362435219f573933;hpb=fddf3084802b37e5cee17829e32692a4aac3e60d;p=jalview.git diff --git a/test/MCview/PDBfileTest.java b/test/MCview/PDBfileTest.java index 1dfeba9..3e24f52 100644 --- a/test/MCview/PDBfileTest.java +++ b/test/MCview/PDBfileTest.java @@ -71,8 +71,8 @@ public class PDBfileTest assertTrue(chainA.sequence.getSequenceAsString().endsWith("WNVEVY")); assertEquals("3W5V|A", chainA.sequence.getName()); assertNull(chainA.sequence.getAnnotation()); - assertEquals(1, chainA.sequence.getPDBId().size()); - PDBEntry pdb = chainA.sequence.getPDBId().get(0); + assertEquals(1, chainA.sequence.getAllPDBEntries().size()); + PDBEntry pdb = chainA.sequence.getAllPDBEntries().get(0); assertEquals("A", pdb.getChainCode()); assertEquals("PDB", pdb.getType()); assertEquals("3W5V", pdb.getId()); @@ -107,8 +107,8 @@ public class PDBfileTest assertEquals("3W5V|B", seqs.get(1).getName()); assertEquals("3W5V|C", seqs.get(2).getName()); assertEquals("3W5V|D", seqs.get(3).getName()); - assertEquals(1, seqs.get(0).getPDBId().size()); - PDBEntry pdbe = seqs.get(0).getPDBId().get(0); + assertEquals(1, seqs.get(0).getAllPDBEntries().size()); + PDBEntry pdbe = seqs.get(0).getAllPDBEntries().get(0); assertEquals("A", pdbe.getChainCode()); assertEquals("3W5V", pdbe.getId()); assertEquals(PDBEntry.Type.PDB.toString(), pdbe.getType());