X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FAlignmentAnnotationUtilsTest.java;h=f41262c81c14168331e427091eceaf0405d000f9;hb=d603dfa09e451bde0b376798f68d60c2708dd2b8;hp=610a60ad482c1d20b79fb076824a644c35f1c1f3;hpb=5f4e1e4c330b045e9c8bce28ee132a0fca3834d8;p=jalview.git diff --git a/test/jalview/analysis/AlignmentAnnotationUtilsTest.java b/test/jalview/analysis/AlignmentAnnotationUtilsTest.java index 610a60a..f41262c 100644 --- a/test/jalview/analysis/AlignmentAnnotationUtilsTest.java +++ b/test/jalview/analysis/AlignmentAnnotationUtilsTest.java @@ -29,7 +29,8 @@ import jalview.datamodel.AlignmentI; import jalview.datamodel.Annotation; import jalview.datamodel.SequenceI; import jalview.gui.JvOptionPane; -import jalview.io.AppletFormatAdapter; +import jalview.io.DataSourceType; +import jalview.io.FileFormat; import java.io.IOException; import java.util.ArrayList; @@ -152,7 +153,7 @@ public class AlignmentAnnotationUtilsTest public void setUp() throws IOException { alignment = new jalview.io.FormatAdapter().readFile(TEST_DATA, - AppletFormatAdapter.PASTE, "FASTA"); + DataSourceType.PASTE, FileFormat.Fasta); AlignmentAnnotation[] anns = new AlignmentAnnotation[SEQ_ANN_COUNT]; for (int i = 0; i < anns.length; i++)