X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FDnaAlignmentGenerator.java;h=60dd929ec22836871c1d0c0fb94080a64d142d2e;hb=483e7163b1fb8d4bcb9393014816c944befce328;hp=69e5c2314d824fc9c945eac287b40d05f86bd776;hpb=8f118c154e74caaef6bec19acd0466904ac424d4;p=jalview.git

diff --git a/test/jalview/analysis/DnaAlignmentGenerator.java b/test/jalview/analysis/DnaAlignmentGenerator.java
index 69e5c23..60dd929 100644
--- a/test/jalview/analysis/DnaAlignmentGenerator.java
+++ b/test/jalview/analysis/DnaAlignmentGenerator.java
@@ -24,11 +24,14 @@ import jalview.datamodel.Alignment;
 import jalview.datamodel.AlignmentI;
 import jalview.datamodel.Sequence;
 import jalview.datamodel.SequenceI;
+import jalview.gui.JvOptionPane;
 import jalview.io.FastaFile;
 
 import java.util.Arrays;
 import java.util.Random;
 
+import org.testng.annotations.BeforeClass;
+
 /**
  * Generates, and outputs in Fasta format, a random DNA alignment for given
  * sequence length and count. Will regenerate the same alignment each time if
@@ -50,6 +53,14 @@ import java.util.Random;
  */
 public class DnaAlignmentGenerator
 {
+
+  @BeforeClass(alwaysRun = true)
+  public void setUpJvOptionPane()
+  {
+    JvOptionPane.setInteractiveMode(false);
+    JvOptionPane.setMockResponse(JvOptionPane.CANCEL_OPTION);
+  }
+
   private static final char GAP = '-';
 
   private static final char ZERO = '0';
@@ -58,6 +69,7 @@ public class DnaAlignmentGenerator
 
   private Random random;
 
+
   /**
    * Outputs a DNA 'alignment' where each position is a random choice from
    * 'GTCA-'.
@@ -83,7 +95,7 @@ public class DnaAlignmentGenerator
             + " bases with " + gapPercentage + "% gaps and "
             + changePercentage + "% mutations (random seed = " + randomSeed
             + ")");
-    System.out.println(new FastaFile().print(al.getSequencesArray()));
+    System.out.println(new FastaFile().print(al.getSequencesArray(), true));
   }
 
   /**