X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FFinderTest.java;h=319c998391e5b877b46fda4619a87f80b5f1a45a;hb=d043ce47fc710d3eb2629ba926a8a7417bd67d8c;hp=462b165ee0f7b5674ad9e28fb3dbfb85ceb704fd;hpb=49db0dff1da16c3355b43a41498c1fc93ef47e91;p=jalview.git diff --git a/test/jalview/analysis/FinderTest.java b/test/jalview/analysis/FinderTest.java index 462b165..319c998 100644 --- a/test/jalview/analysis/FinderTest.java +++ b/test/jalview/analysis/FinderTest.java @@ -131,11 +131,12 @@ public class FinderTest * single symbol should find *all* matching symbols */ Finder f = new Finder(av); - f.findAll("M", false,false,false); + f.findAll("M", false, false, false); SearchResultsI sr = f.getSearchResults(); - assertEquals(sr.getCount(),5); - + assertEquals(sr.getCount(), 5); + } + /** * Test for (undocumented) find residue by position */ @@ -575,7 +576,7 @@ public class FinderTest sg.addSequence(al.getSequenceAt(1), false); sg.addSequence(al.getSequenceAt(2), false); av.setSelectionGroup(sg); - + /* * search for 'e' should match two sequence ids and one residue */ @@ -641,8 +642,8 @@ public class FinderTest } /** - * Test that find does not report hidden positions, but does report matches that - * span hidden gaps + * Test that find does not report hidden positions, but does report matches + * that span hidden gaps */ @Test(groups = "Functional") public void testFind_withHiddenColumns() @@ -770,7 +771,7 @@ public class FinderTest * --bcdEFH * aa---aMMMMMaaa */ - + /* * hide columns 2-4 and 6-7 */ @@ -778,7 +779,7 @@ public class FinderTest hc.hideColumns(2, 4); hc.hideColumns(6, 7); al.setHiddenColumns(hc); - + /* * select rows 2-3 */