X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FFinderTest.java;h=d7a509fde23261601142a0c0f2537dbe6e43c245;hb=5346ea15df13baf5b342e467b70358c2212fd1ef;hp=bae98c5ee115b3de6b23efbc04e0ca6d55d2cfa1;hpb=5f4e1e4c330b045e9c8bce28ee132a0fca3834d8;p=jalview.git diff --git a/test/jalview/analysis/FinderTest.java b/test/jalview/analysis/FinderTest.java index bae98c5..d7a509f 100644 --- a/test/jalview/analysis/FinderTest.java +++ b/test/jalview/analysis/FinderTest.java @@ -1,3 +1,23 @@ +/* + * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$) + * Copyright (C) $$Year-Rel$$ The Jalview Authors + * + * This file is part of Jalview. + * + * Jalview is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. + * + * Jalview is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty + * of MERCHANTABILITY or FITNESS FOR A PARTICULAR + * PURPOSE. See the GNU General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + */ package jalview.analysis; import static org.testng.Assert.assertEquals; @@ -11,8 +31,8 @@ import jalview.datamodel.SearchResultsI; import jalview.datamodel.Sequence; import jalview.gui.AlignFrame; import jalview.gui.JvOptionPane; +import jalview.io.DataSourceType; import jalview.io.FileLoader; -import jalview.io.FormatAdapter; import java.util.List; @@ -38,7 +58,7 @@ public class FinderTest String seqData = "seq1 ABCD--EF-GHI\n" + "seq2 A--BCDefHI\n" + "seq3 --bcdEFH\n" + "seq4 aa---aMMMMMaaa\n"; af = new FileLoader().LoadFileWaitTillLoaded(seqData, - FormatAdapter.PASTE); + DataSourceType.PASTE); al = af.getViewport().getAlignment(); }