X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2FSeqsetUtilsTest.java;h=9839ba0343f158440f13be6707fd9843b1a56fc6;hb=278ab954b415ed6682b77e35600a1e55c5d5b2d6;hp=ee364c92b4ab944a32baff06747bbd97672e2728;hpb=b9d3d1f71c6a8aee09cd23e1303b062cbe43a239;p=jalview.git diff --git a/test/jalview/analysis/SeqsetUtilsTest.java b/test/jalview/analysis/SeqsetUtilsTest.java index ee364c9..9839ba0 100644 --- a/test/jalview/analysis/SeqsetUtilsTest.java +++ b/test/jalview/analysis/SeqsetUtilsTest.java @@ -69,18 +69,18 @@ public class SeqsetUtilsTest SequenceI[] sqset2 = new SequenceI[] { new Sequence(sqset[0].getName(), sqset[0].getSequenceAsString()), new Sequence(sqset[1].getName(), sqset[1].getSequenceAsString()) }; - Assert.assertTrue(sqset[0].getSequenceFeatures()[0] == sf1); - Assert.assertEquals(sqset2[0].getSequenceFeatures(), null); + Assert.assertSame(sqset[0].getSequenceFeatures().get(0), sf1); + Assert.assertTrue(sqset2[0].getSequenceFeatures().isEmpty()); ds.getSequenceAt(0).addSequenceFeature(sf2); - Assert.assertEquals(sqset[0].getSequenceFeatures().length, 2); + Assert.assertEquals(sqset[0].getSequenceFeatures().size(), 2); SeqsetUtils.deuniquify(unq, sqset2); // explicitly test that original sequence features still exist because they // are on the shared dataset sequence - Assert.assertEquals(sqset[0].getSequenceFeatures().length, 2); - Assert.assertEquals(sqset2[0].getSequenceFeatures().length, 2); - Assert.assertTrue(sqset[0].getSequenceFeatures()[0] == sqset2[0] - .getSequenceFeatures()[0]); - Assert.assertTrue(sqset[0].getSequenceFeatures()[1] == sqset2[0] - .getSequenceFeatures()[1]); + Assert.assertEquals(sqset[0].getSequenceFeatures().size(), 2); + Assert.assertEquals(sqset2[0].getSequenceFeatures().size(), 2); + Assert.assertSame(sqset[0].getSequenceFeatures().get(0), sqset2[0] + .getSequenceFeatures().get(0)); + Assert.assertSame(sqset[0].getSequenceFeatures().get(1), sqset2[0] + .getSequenceFeatures().get(1)); } }