X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2Fscoremodels%2FScoreMatrixTest.java;fp=test%2Fjalview%2Fanalysis%2Fscoremodels%2FScoreMatrixTest.java;h=ec3fab3c9dace22612a4a04936195005c8166ed9;hb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;hp=15bdce1784005587479d8be6649afe4042574ffa;hpb=e7338a61f3ce96dadf44ac80b2b32cc5ba4b94c8;p=jalview.git diff --git a/test/jalview/analysis/scoremodels/ScoreMatrixTest.java b/test/jalview/analysis/scoremodels/ScoreMatrixTest.java index 15bdce1..ec3fab3 100644 --- a/test/jalview/analysis/scoremodels/ScoreMatrixTest.java +++ b/test/jalview/analysis/scoremodels/ScoreMatrixTest.java @@ -670,7 +670,8 @@ public class ScoreMatrixTest String[] seqs2 = new String[] { seq2, seq1 }; MatrixI res2 = sm.findSimilarities(seqs2, params); assertFalse(res1.equals(res2)); - assertTrue(res2.equals(new Matrix(new double[][] + assertTrue( + res2.equals(new Matrix(new double[][] { { 16d, 3d }, { 3d, 14d } }), delta)); /* @@ -684,7 +685,8 @@ public class ScoreMatrixTest sm = new ScoreMatrix("Test", "AB".toCharArray(), scores); assertFalse(sm.isSymmetric()); // [0, 1] != [1, 0] res1 = sm.findSimilarities(seqs1, params); - assertTrue(res1.equals(new Matrix(new double[][] + assertTrue( + res1.equals(new Matrix(new double[][] { { 14d, 7d }, { 11d, 16d } }), delta)); /*