X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fanalysis%2Fscoremodels%2FScoreMatrixTest.java;h=1076d43de9fea3e21d704c906c499807b7aa169b;hb=8717834368bd00d8adfa47ee099288acd34363ef;hp=01de7415bd806e0c032b87af95c4bcaeec701d88;hpb=70af62ad365829d2fc430db10336cf13c4d4ce1a;p=jalview.git

diff --git a/test/jalview/analysis/scoremodels/ScoreMatrixTest.java b/test/jalview/analysis/scoremodels/ScoreMatrixTest.java
index 01de741..1076d43 100644
--- a/test/jalview/analysis/scoremodels/ScoreMatrixTest.java
+++ b/test/jalview/analysis/scoremodels/ScoreMatrixTest.java
@@ -171,7 +171,7 @@ public class ScoreMatrixTest
     String[] seqs = new String[] { "FKL", "R D", "QIA", "GWC" };
     ScoreMatrix sm = ScoreModels.getInstance().getBlosum62();
 
-    MatrixI pairwise = sm.findSimilarities(seqs);
+    MatrixI pairwise = sm.findSimilarities(seqs, SimilarityParams.Jalview);
 
     /*
      * should be NxN where N = number of sequences