X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fbin%2FCommandLineOperations.java;h=0486744cadcfecbd2e8b4a01f91c7d3670f580e9;hb=a7169b1c72607f3c9357195b4999869650a2a891;hp=9b9adf815ff5a7cbf22b6d184c0df84662c03855;hpb=13cb17a0bdff818a32d253e2199105d9def58796;p=jalview.git

diff --git a/test/jalview/bin/CommandLineOperations.java b/test/jalview/bin/CommandLineOperations.java
index 9b9adf8..0486744 100644
--- a/test/jalview/bin/CommandLineOperations.java
+++ b/test/jalview/bin/CommandLineOperations.java
@@ -34,7 +34,6 @@ import java.util.ArrayList;
 import org.testng.Assert;
 import org.testng.FileAssert;
 import org.testng.annotations.BeforeClass;
-import org.testng.annotations.BeforeTest;
 import org.testng.annotations.DataProvider;
 import org.testng.annotations.Test;
 
@@ -54,7 +53,7 @@ public class CommandLineOperations
   }
 
   // Note longer timeout needed on full test run than on individual tests
-  private static final int TEST_TIMEOUT = 23000;
+  private static final int TEST_TIMEOUT = 15000;
 
   private static final int SETUP_TIMEOUT = 9500;
 
@@ -213,13 +212,13 @@ public class CommandLineOperations
     }
   }
 
-  @BeforeTest(alwaysRun = true)
+  @BeforeClass(alwaysRun = true)
   public void initialize()
   {
     new CommandLineOperations();
   }
 
-  @BeforeTest(alwaysRun = true)
+  @BeforeClass(alwaysRun = true)
   public void setUpForHeadlessCommandLineInputOperations()
           throws IOException
   {
@@ -239,7 +238,7 @@ public class CommandLineOperations
     }
   }
 
-  @BeforeTest(alwaysRun = true)
+  @BeforeClass(alwaysRun = true)
   public void setUpForCommandLineInputOperations() throws IOException
   {
     String cmds = "-open examples/uniref50.fa -noquestionnaire -nousagestats";
@@ -261,7 +260,7 @@ public class CommandLineOperations
         int count = 0;
         try
         {
-          while ((ln = worker.getErrorReader().readLine()) != null)
+          while ((ln = worker.getOutputReader().readLine()) != null)
           {
             System.out.println(ln);
             successfulCMDs.add(ln);