X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fcommands%2FEditCommandTest.java;fp=test%2Fjalview%2Fcommands%2FEditCommandTest.java;h=61ca5a6a045bcd88c1547907cf68584ff7cb94ab;hb=c29cd7be43dcd8575d1b4b1e53920117af706ca4;hp=a0c2ccfddec49c0125f159955df0822d072b6f66;hpb=51c792ab859d3979c966678f2fed8e1103b43d78;p=jalview.git

diff --git a/test/jalview/commands/EditCommandTest.java b/test/jalview/commands/EditCommandTest.java
index a0c2ccf..61ca5a6 100644
--- a/test/jalview/commands/EditCommandTest.java
+++ b/test/jalview/commands/EditCommandTest.java
@@ -282,6 +282,27 @@ public class EditCommandTest
   }
 
   /**
+   * Test the replace command (used to manually edit a sequence)
+   */
+  @Test(groups = { "Functional" })
+  public void testReplace_withGaps()
+  {
+    SequenceI seq = new Sequence("seq", "ABC--DEF");
+    seq.createDatasetSequence();
+    assertEquals("ABCDEF", seq.getDatasetSequence().getSequenceAsString());
+
+    /*
+     * replace C- with XYZ
+     * NB arg4 = start column of selection for edit (base 0)
+     * arg5 = column after end of selection for edit
+     */
+    new EditCommand("", Action.REPLACE, "XYZ", new SequenceI[] { seq }, 2,
+            4, al);
+    assertEquals("ABXYZ-DEF", seq.getSequenceAsString());
+    assertEquals("ABXYZDEF", seq.getDatasetSequence().getSequenceAsString());
+  }
+
+  /**
    * Test replace command when it doesn't cause a sequence edit (see comment in
    */
   @Test(groups = { "Functional" })