X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FAlignedCodonIteratorTest.java;h=d9c7e120018b48e00546529ab83961d720763fbc;hb=refs%2Fheads%2Ffeatures%2FJAL-857_dynamic-example-files;hp=3e3a46dfbee92eda8d618127f992b38f97398922;hpb=3412b273e964fb1a9d22564b04a5f0c827ec2461;p=jalview.git diff --git a/test/jalview/datamodel/AlignedCodonIteratorTest.java b/test/jalview/datamodel/AlignedCodonIteratorTest.java index 3e3a46d..d9c7e12 100644 --- a/test/jalview/datamodel/AlignedCodonIteratorTest.java +++ b/test/jalview/datamodel/AlignedCodonIteratorTest.java @@ -2,12 +2,14 @@ package jalview.datamodel; import static org.testng.AssertJUnit.assertEquals; import static org.testng.AssertJUnit.assertFalse; -import org.testng.annotations.Test; -import org.testng.Assert; + import jalview.util.MapList; import java.util.Iterator; +import org.testng.Assert; +import org.testng.annotations.Test; + /** * Unit tests for Mapping$AlignedCodonIterator * @@ -19,7 +21,7 @@ public class AlignedCodonIteratorTest /** * Test normal case for iterating over aligned codons. */ - @Test + @Test(groups ={ "Functional" }) public void testNext() { SequenceI from = new Sequence("Seq1", "-CgC-C-cCtAG-AtG-Gc"); @@ -47,7 +49,7 @@ public class AlignedCodonIteratorTest /** * Test weird case where the mapping skips over a peptide. */ - @Test + @Test(groups ={ "Functional" }) public void testNext_unmappedPeptide() { SequenceI from = new Sequence("Seq1", "-CgC-C-cCtAG-AtG-Gc"); @@ -75,7 +77,7 @@ public class AlignedCodonIteratorTest /** * Test for exception thrown for an incomplete codon. */ - @Test + @Test(groups ={ "Functional" }) public void testNext_incompleteCodon() { SequenceI from = new Sequence("Seq1", "-CgC-C-cCgTt"); @@ -104,7 +106,7 @@ public class AlignedCodonIteratorTest /** * Test normal case for iterating over aligned codons. */ - @Test + @Test(groups ={ "Functional" }) public void testAnother() { SequenceI from = new Sequence("Seq1", "TGCCATTACCAG-");