X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FAlignmentAnnotationTests.java;h=94ea5f847e62ad1b0ef5315e4dffa8129641c2cb;hb=4bc5c1c97bd08007b2ac9ccfd9b3cb29eac10193;hp=2f46ecab0eda38bc336103e60dd62371e08884c9;hpb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;p=jalview.git

diff --git a/test/jalview/datamodel/AlignmentAnnotationTests.java b/test/jalview/datamodel/AlignmentAnnotationTests.java
index 2f46eca..94ea5f8 100644
--- a/test/jalview/datamodel/AlignmentAnnotationTests.java
+++ b/test/jalview/datamodel/AlignmentAnnotationTests.java
@@ -20,7 +20,9 @@
  */
 package jalview.datamodel;
 
+import static org.testng.Assert.assertFalse;
 import static org.testng.Assert.assertNull;
+import static org.testng.Assert.assertTrue;
 import static org.testng.AssertJUnit.assertEquals;
 
 import jalview.analysis.AlignSeq;
@@ -426,4 +428,24 @@ public class AlignmentAnnotationTests
     assertNull(ann.annotations[0]);
     assertNull(ann.annotations[4]);
   }
+
+  /**
+   * test the contact matrix nogroups property methods
+   */
+  @Test(groups = { "Functional" })
+  public void test_contactMatrixGroups()
+  {
+    AlignmentAnnotation aa = new AlignmentAnnotation("foo", "foo desc",
+            null);
+    assertTrue(aa.isShowGroupsForContactMatrix());
+    aa.setShowGroupsForContactMatrix(false);
+    assertFalse(aa.isShowGroupsForContactMatrix());
+    AlignmentAnnotation copy = new AlignmentAnnotation(aa);
+    assertFalse(copy.isShowGroupsForContactMatrix());
+    aa.setShowGroupsForContactMatrix(true);
+    assertTrue(aa.isShowGroupsForContactMatrix());
+    // copy should not be updated
+    assertFalse(copy.isShowGroupsForContactMatrix());
+
+  }
 }