X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FAlignmentTest.java;fp=test%2Fjalview%2Fdatamodel%2FAlignmentTest.java;h=89121556f1427e90f4b8ea2bd2f1ba424693c348;hb=285b51fa6f49054040c72dfb2a64db637dc05c79;hp=2b1fc72379724ce696c8e7cd25e4d46eb7289ed2;hpb=1d21f595873869193bd4821e1af9c4eb56c5f158;p=jalview.git diff --git a/test/jalview/datamodel/AlignmentTest.java b/test/jalview/datamodel/AlignmentTest.java index 2b1fc72..8912155 100644 --- a/test/jalview/datamodel/AlignmentTest.java +++ b/test/jalview/datamodel/AlignmentTest.java @@ -125,7 +125,7 @@ public class AlignmentTest * Make mappings between sequences. The 'aligned cDNA' is playing the role * of what would normally be protein here. */ - AlignedCodonFrame acf = new AlignedCodonFrame(al1.getWidth()); + AlignedCodonFrame acf = new AlignedCodonFrame(); MapList ml = new MapList(new int[] { 1, 12 }, new int[] { 1, 12 }, 1, 1); @@ -171,7 +171,7 @@ public class AlignmentTest */ AlignmentI al1 = loadAlignment(CDNA_SEQS_1, "FASTA"); AlignmentI al2 = loadAlignment(AA_SEQS_1, "FASTA"); - AlignedCodonFrame acf = new AlignedCodonFrame(al2.getWidth()); + AlignedCodonFrame acf = new AlignedCodonFrame(); MapList ml = new MapList(new int[] { 1, 12 }, new int[] { 1, 4 }, 3, 1);