X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FCigarArrayTest.java;h=7bee4234505156a85e0700995cdbc5a9d7753880;hb=7bf12085343eb53718fc159b281823243f2c9f9b;hp=20dcc96cd6283e5ecb3667ff9d9b558d48f3255f;hpb=19a6c92c82afe36f99e485a88237681861045430;p=jalview.git

diff --git a/test/jalview/datamodel/CigarArrayTest.java b/test/jalview/datamodel/CigarArrayTest.java
index 20dcc96..7bee423 100644
--- a/test/jalview/datamodel/CigarArrayTest.java
+++ b/test/jalview/datamodel/CigarArrayTest.java
@@ -68,8 +68,13 @@ public class CigarArrayTest
     // we are comparing a sequence to its own subsequence (the group) + hidden
     // columns.
 
-    CigarArray cig = new CigarArray(al, hc, sg1);
+    // no hidden columns case
+    CigarArray cig = new CigarArray(al, null, sg1);
     String result = cig.getCigarstring();
+    assertEquals(result, "22M");
+
+    cig = new CigarArray(al, hc, sg1);
+    result = cig.getCigarstring();
     assertEquals(result, "1M4D9M5D3M");
 
     // group starts at hidden cols