X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=test%2Fjalview%2Fdatamodel%2FMappedFeaturesTest.java;fp=test%2Fjalview%2Fdatamodel%2FMappedFeaturesTest.java;h=d4a49c69b2dbaa3027b8d79097154373137768f0;hb=57738a1f3c19b1c3a00bd3ac5108f8cd0af32f99;hp=de4ce6cb49f5ec8437ab99d23a636588215ac4c2;hpb=e7338a61f3ce96dadf44ac80b2b32cc5ba4b94c8;p=jalview.git diff --git a/test/jalview/datamodel/MappedFeaturesTest.java b/test/jalview/datamodel/MappedFeaturesTest.java index de4ce6c..d4a49c6 100644 --- a/test/jalview/datamodel/MappedFeaturesTest.java +++ b/test/jalview/datamodel/MappedFeaturesTest.java @@ -34,8 +34,8 @@ public class MappedFeaturesTest * T>C at dna13, consequence CGT>CGC synonymous */ List features = new ArrayList<>(); - SequenceFeature sf1 = new SequenceFeature("sequence_variant", "C,T", - 11, 11, null); + SequenceFeature sf1 = new SequenceFeature("sequence_variant", "C,T", 11, + 11, null); sf1.setValue("alleles", "C,T"); features.add(sf1); SequenceFeature sf2 = new SequenceFeature("sequence_variant", "T,C", 13, @@ -46,8 +46,7 @@ public class MappedFeaturesTest /* * missense variant in first codon */ - MappedFeatures mf = new MappedFeatures(mapping, from, 1, 'R', - features); + MappedFeatures mf = new MappedFeatures(mapping, from, 1, 'R', features); String variant = mf.findProteinVariants(sf1); assertEquals(variant, "p.Arg1Cys");